| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A0950 |
|---|
| Symbol | prmA |
|---|
| ID | 4787333 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylibium petroleiphilum PM1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008825 |
|---|
| Strand | + |
|---|
| Start bp | 1005875 |
|---|
| End bp | 1007542 |
|---|
| Gene Length | 1668 bp |
|---|
| Protein Length | 555 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640089512 |
|---|
| Product | propane monoxygenase hydroxylase large subunit |
|---|
| Protein accession | YP_001020147 |
|---|
| Protein GI | 124266143 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCAGCAG GTTTGACGCT CAACAAGATC ACGTCCCAGA AAGGGATCAG CGTGGCCGAG
GCGGCTCGGC GCATCGCCGA CCTCGGATGG CAGCCCAGCT ATGTCCAGGA AGCGATGACC
TTCCCGACCG ATTACAAGAT CGGCAAGGCC CCGCGCGACC CGATGAAGCA GGTGCTGCGC
TCCTACTTCC CGATGCAGGA GGAGAAGGAC AACCGCGTGT ACGGCGCGCT CGACGCGGCG
CTGCGCGGCG ACATGTTCCG CAACACCAAG CCGCGCTGGG TCGAGTGGAT GAAGCTGTTC
CTGGCGATCA TCCCCTTCCC CGAGATCTCG GCGGCACGCT CGATGTCCAT GCTCGGCCGC
CTCGCCCCGG GCGAGGAGCT GCGCACCGGC TTCACGATGC AGATGGTCGA CGAGTTCCGC
CATTCCACGA TTCAGATGAA CCTGAAGAAG TGGTACATGG AGAACTACAT CGACCCGGCC
GGCTTCGACA TCACCGAGGC CGCGTTCGGC AAGTGCTACG CCACCACCAT CGGCCGCCAG
TTCGCCGAAG GCTTCCTGAC CGGTGACGCG CTGACGGCCG CGAACATCTA CCTGCAGGTC
GTCGCCGAGA CCGGCTTCAC CAACACGCTG TTCGTCGCGA TGCCGTCGGA AGCTGCCCGC
AACGGCGACT ACGCGCTGTC GTCGGTGTTC CTGTCGGTGC AGTCGGACGA GTCGCGCCAC
ATCGGCAACG GCCACTCGCT GCTGATGTCG GTGGTCAACG ACCCCGACAA CCACCTGCTG
CTCGAGCGCG ACATCCGCTA CGCGTTCTGG CAGAACCACG CGATCGTCGA CGCCGCCATC
GGCACGATCA TCGAGTACGG CACCACCGAC CGCAGCAAGA ACAAGGAGTC CTACGCCGAG
CTCTGGCACC GCTGGATCTA CGAGGACTAC TACCGCACCT ACCTGCTCCC GCTCGAGAAG
TACGGCGTCA AGATCCACCA CGACGACGTC TCCGCCGCGT GGGACCGCCT GGTCAAGAAG
AACTACGTGC ACAAGGTCGC GCAGTTCTTC GCGGTCGGCT GGCCCGCCAA CTTCTGGCGC
ATCGAAGCCC AGACCGAGAA GGACTTCGAG TGGTTCGAGC ACAAGTACCC GGGCTGGTAC
GCCGAGTTCG GCGATTTCTG GAAGTGGTAC GAGCGCAAGA GCGTGCCGGG CGAGACCAAC
ATGCTGTTCG ACCAGGAGAA CGGCTACGTC TACCCGCACC GCTGCTGGAG CTGCATGGTG
CCGGCGGTGA TCCGTGAGGA GCTGGTGGTC GACGAGGTCG ACGGCAAGCT CTACACCTAC
TGCTCCGAGC TGTGCCGCTG GACCCACAAG ACGGCCTTCG CCGCCGAGTA CGAGGGCCGC
CCGACGCCGG CGATGGGCCG CTTCAGCGGT CGCCGCGAAT GGGAAGAGTG CTACCACGGC
TGGGACCTGG CCGACGCGAT CAAGGACCTC GGCTTCGTCC GCTCGGACGG CAAGACGCTG
GTCTCGCAGC CCCACCTGCG CTTCGACGAC AAGCACATGT GGACGCTGGA TCACGTGCGG
GGCCACCAGC TCCAGAGCCC GCTCGTGCTT CTGCGCGAGA TGACGCCCGA GGCGCGTGAG
AAGCACATCG CCTCCTACCG CGCCGGCTTC AAGATCAAGC CGTTCTGA
|
|---|
| Protein sequence | MSAGLTLNKI TSQKGISVAE AARRIADLGW QPSYVQEAMT FPTDYKIGKA PRDPMKQVLR
SYFPMQEEKD NRVYGALDAA LRGDMFRNTK PRWVEWMKLF LAIIPFPEIS AARSMSMLGR
LAPGEELRTG FTMQMVDEFR HSTIQMNLKK WYMENYIDPA GFDITEAAFG KCYATTIGRQ
FAEGFLTGDA LTAANIYLQV VAETGFTNTL FVAMPSEAAR NGDYALSSVF LSVQSDESRH
IGNGHSLLMS VVNDPDNHLL LERDIRYAFW QNHAIVDAAI GTIIEYGTTD RSKNKESYAE
LWHRWIYEDY YRTYLLPLEK YGVKIHHDDV SAAWDRLVKK NYVHKVAQFF AVGWPANFWR
IEAQTEKDFE WFEHKYPGWY AEFGDFWKWY ERKSVPGETN MLFDQENGYV YPHRCWSCMV
PAVIREELVV DEVDGKLYTY CSELCRWTHK TAFAAEYEGR PTPAMGRFSG RREWEECYHG
WDLADAIKDL GFVRSDGKTL VSQPHLRFDD KHMWTLDHVR GHQLQSPLVL LREMTPEARE
KHIASYRAGF KIKPF
|
|---|
| |