Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpe_A0900 |
Symbol | |
ID | 4787223 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylibium petroleiphilum PM1 |
Kingdom | Bacteria |
Replicon accession | NC_008825 |
Strand | + |
Start bp | 951638 |
End bp | 952489 |
Gene Length | 852 bp |
Protein Length | 283 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640089461 |
Product | 3-hydroxybutyryl-CoA dehydrogenase |
Protein accession | YP_001020097 |
Protein GI | 124266093 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1250] 3-hydroxyacyl-CoA dehydrogenase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.150409 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCGGTC AAACAATCGG CGTCATCGGC GCCGGCACCA TGGGCAACGG CATCGCGCAG GTGTGCGCGA TGGCCGGGCT GGACGTGACG CTGGTCGACG TGTCGGACGC GGCGGTCGCG CGCGGCCTCG CGACGCTGGG CAACAGCCTG GAGCGGCTGG TCAAGAAGGA CAAGCTGACG GCCGCGGCCA GCGCCGCGGC GCTGGCACGC GTGCGCGGCA CGACCGACTA CGCGGCGCTG GCCGGGGCCG ACCTCGTGAT CGAGGCCGCC ACCGAGAACC TGGCGCTGAA GCTGCGCATC CTGCAGCAGC TCGCCGAGGT GGTGCGCGAG GACGCGGTGA TCGCGACCAA CACCTCGTCG ATCAGCATCA CCCAGCTGGC CGCGGCGGTG AAGGCGCCCG AGCGCTTCGT CGGCATGCAC TTCTTCAACC CGGTGCCGCT GATGGCGCTG GTGGAGGTGA TCGGCGGCCT GCAGACCTCG GACGCGACGC GCGAGCGTGC GCTGGCCTTC GTCAAGTCCA TCGGCAAGAC GCCGATCGCG GTGAAGAACA GCCCGGGATT CGCGGTCAAC CGCATTCTGG TGCCGATGAT CAACGAGGCG ATCTTCGTGC TGCAGGAGGG CCTGGCCAGC GCCGAGGACA TCGACGCCGG CATGACGCTG GGCTGCAACC AGCCGATCGG CCCGCTGGCG CTGGCCGACC TGATCGGCCT GGACACGCTG CTCGCGGTGA TGCAGGTGTT CAGCGAGGGA TTCGACGACC CGAAGTACCG GCCCGCGCCG CTGCTGAAGG AAATGGTGGC CGCCGGCCGC CTGGGCCGCA AGAGCGGCCG CGGCTTCTAC ACCTACGCCT GA
|
Protein sequence | MSGQTIGVIG AGTMGNGIAQ VCAMAGLDVT LVDVSDAAVA RGLATLGNSL ERLVKKDKLT AAASAAALAR VRGTTDYAAL AGADLVIEAA TENLALKLRI LQQLAEVVRE DAVIATNTSS ISITQLAAAV KAPERFVGMH FFNPVPLMAL VEVIGGLQTS DATRERALAF VKSIGKTPIA VKNSPGFAVN RILVPMINEA IFVLQEGLAS AEDIDAGMTL GCNQPIGPLA LADLIGLDTL LAVMQVFSEG FDDPKYRPAP LLKEMVAAGR LGRKSGRGFY TYA
|
| |