| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A0890 |
|---|
| Symbol | |
|---|
| ID | 4787213 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylibium petroleiphilum PM1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008825 |
|---|
| Strand | + |
|---|
| Start bp | 935153 |
|---|
| End bp | 936085 |
|---|
| Gene Length | 933 bp |
|---|
| Protein Length | 310 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640089451 |
|---|
| Product | putative lipase |
|---|
| Protein accession | YP_001020087 |
|---|
| Protein GI | 124266083 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0657] Esterase/lipase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.120136 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCACTGG ACCCGCAAGT ACAAGGATTG CTCGATGCGT TCAAGGCGCA GGGCCTGAAG
AGCTTCGAGC AGATGACGGT GCCCGAATCC CGCGAGACTG CCATGGCCTT CGTCGGCCTG
GAAGGCGACG AGGAGGCGGT AGCCGATGTG TCGAATCACC GTGTGCCGGT GAAGGGCGGC
GACATCGCCG TGCGCATCTA CCGGCCAGCG GGCAACGCAC CGCACCCGAT GCTGGTTTAC
TTCCACGGCG GCGGCTTCGT GTTCGGCAAC CTGGATCTGG TCGACAAGGT CGCCCGCTCG
CTGTGCAACG CGTCCAATGC GGCGGTGGTC TCGGTCGACT ACCGCAAGGC ACCCGAGCAC
CCCTATCCCA CGGCGCCGGA GGATGCCTAC GCCGGCCTGG TGTGGGCGCG CGAGAACGCC
GCGAAGCTGG GGCTCGATCC GGCCCGCATC GCGGTGGCCG GCGACAGCGC CGGTGGCAAC
CTCGCGGCGG TCGTGTCGCA GATGGCACGT GACCGCAAGG GCCCGAAGAT CGCCCACCAG
GTGCTGGTCT ACCCGGTCAC CGACGCGGCG GGCGACTACC CCTCGCGCAA GGAAAACGCC
GAAGGCTACC TGCTGACCCA GGGTGCGATG AACTGGTTCT TCGGCCATTA CCTGACGAGT
CCCGGCCTGG CGAGCGACGC CTATGTCTCG CCGATCAAGG GGGATCTCAA GGGCCTGCCC
GCCGCCACCG TGATCACCGC CGGCTACGAC CCGCTGCGCG ACGAGGGCGA TGCCTACGCC
AAGGCGCTGG CGAAGGCCGG TGTGGCGGTC GACCACGTGC CCAACCCGAC GATGATCCAC
GGCTTCTTCT GGATGAAGGG CGTGATCGGC CACACGCAGA GCATCTACGA CCGCGTCGGC
AGGAACCTGA AGGCCGCGTT CGGGACCGCC TGA
|
|---|
| Protein sequence | MSLDPQVQGL LDAFKAQGLK SFEQMTVPES RETAMAFVGL EGDEEAVADV SNHRVPVKGG
DIAVRIYRPA GNAPHPMLVY FHGGGFVFGN LDLVDKVARS LCNASNAAVV SVDYRKAPEH
PYPTAPEDAY AGLVWARENA AKLGLDPARI AVAGDSAGGN LAAVVSQMAR DRKGPKIAHQ
VLVYPVTDAA GDYPSRKENA EGYLLTQGAM NWFFGHYLTS PGLASDAYVS PIKGDLKGLP
AATVITAGYD PLRDEGDAYA KALAKAGVAV DHVPNPTMIH GFFWMKGVIG HTQSIYDRVG
RNLKAAFGTA
|
|---|
| |