| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A0858 |
|---|
| Symbol | |
|---|
| ID | 4787151 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylibium petroleiphilum PM1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008825 |
|---|
| Strand | - |
|---|
| Start bp | 893286 |
|---|
| End bp | 894218 |
|---|
| Gene Length | 933 bp |
|---|
| Protein Length | 310 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 640089419 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001020055 |
|---|
| Protein GI | 124266051 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3302] DMSO reductase anchor subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.153699 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.69291 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCACCCCG CGTTCTCGAT CGTCTTCTTC ACCACGCTGG CCGGCGTCGC GCAGGGCCTG
GTGGTGGCGC TCGCCTTGGC GGTGCTGCTC GGCCCGGCAC CGTCCGTCGG CTTCCTGAGC
GCGGCGCTGC TGCTGGCCGG CGTGCTGCTG CTGCTCGGCC TGGGCGCCTC CTTCCTGCAC
CTGGGCCGGC CCGAACGGGC CTGGCGCGCG GTGCTGATGT GGCGCACCTC GTGGATGTCG
CGCGAGGTGA TCGTGCTGCC TGCCTTCATC GGCATCGTGG CGGTGTGGTG GCTGGCGCTT
CGATGGGGCG TTGTCACGCC GTGGGCGACG CTGCTGCCGG TGGCGGCGCT GGTCGGCGCG
GCCGTGCTCT GGTACTGCAC GGCGATGATC TACGCCTGCG TGCGCTTCAT CCAGGAGTGG
GCCCACCCGC TGACGCTGGT GAACTACACG CTGATCGGCC TGTCGTCGGG GCTGGTGCTG
GCCTGCGCGC TGGCGGCCGG CTACGGCGAG GCCGCACTGC TGCGCGCCGT GGCGCCCTGG
GCGCTGATCG CGACGCTGGC CGCCTGGTTC ACGCGCACGC TGGCGTTGCG CCGCAATGCC
GCGCTGAAGC CGAAGTCGAC GCTGCAGTCG GCCACCGGCA TCCGCGCGCC GCAACTGGTG
CAGAAGTCGA TGGGCATGTC GGCGGGCTCG TTCAACACCC GCGAGTTCTT CCATGGCATG
GGGCTGGCCG CGATGCGGCA GACCAAGCTC GCCTTCCTGG TGCTCGGCTT CGCGCTGCCG
TCGCTGCTGC TGGCCTGGGG CCTGCTCGGT GGCCCGGCCG CCGTGTGGTG GCTGGCGCTG
CTGGTGCAGG CGCCGGGGCT GGTGGCCGAG CGCTGGTTCT TCTTCGCCCA GGCCCGCCAC
CCGCAGAACC TGTACTACCA GCAGGTGTCG TGA
|
|---|
| Protein sequence | MHPAFSIVFF TTLAGVAQGL VVALALAVLL GPAPSVGFLS AALLLAGVLL LLGLGASFLH
LGRPERAWRA VLMWRTSWMS REVIVLPAFI GIVAVWWLAL RWGVVTPWAT LLPVAALVGA
AVLWYCTAMI YACVRFIQEW AHPLTLVNYT LIGLSSGLVL ACALAAGYGE AALLRAVAPW
ALIATLAAWF TRTLALRRNA ALKPKSTLQS ATGIRAPQLV QKSMGMSAGS FNTREFFHGM
GLAAMRQTKL AFLVLGFALP SLLLAWGLLG GPAAVWWLAL LVQAPGLVAE RWFFFAQARH
PQNLYYQQVS
|
|---|
| |