| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A0836 |
|---|
| Symbol | |
|---|
| ID | 4786971 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylibium petroleiphilum PM1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008825 |
|---|
| Strand | + |
|---|
| Start bp | 875579 |
|---|
| End bp | 876340 |
|---|
| Gene Length | 762 bp |
|---|
| Protein Length | 253 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640089397 |
|---|
| Product | imidazole glycerol phosphate synthase subunit HisF |
|---|
| Protein accession | YP_001020033 |
|---|
| Protein GI | 124266029 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0107] Imidazoleglycerol-phosphate synthase |
|---|
| TIGRFAM ID | [TIGR00735] imidazoleglycerol phosphate synthase, cyclase subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.742885 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCGCCA AGCGCATCAT CCCCTGCCTC GACGTCACCG GCGGCCGCGT CGTCAAGGGC
GTCAACTTCG TCGAGTTGCG TGATGCCGGC GACCCGGTGG AGATCGCCGC GCGCTACAAC
GAGCAGGGCG CCGACGAACT GACCTTCCTC GACATCACCG CCACCAGCGA CGGGCGCGAC
CTCATCCTGC CCATCATCGA GGCGGTGGCC TCGCAGGTCT TCATCCCGCT CACCGTCGGC
GGCGGAGTGC GCAGCGTCGA GGACGTGCGC CGCCTGCTCA ATGCCGGGGC CGACAAGGTG
AGTTTCAACT CGGCGGCGGT CGCGAACCCG CAGCTGATCC GTGACGCCTC CGACAAGTAC
GGCGCGCAGT GCATCGTGGT CGCCATCGAT GCCAAGGCCC GGGTGGGCGG CGAGGGCTGG
GAGGTCTACA CGCACGGCGG ACGCAGGAAC ACCGGCCTCG ATGCAGTGGC CTGGGCGCAG
CAGATGGCCG AGTTCGGCGC CGGCGAGATC CTGCTGACCA GCATGGACCG CGACGGCACG
CAGATCGGCT TCAACCTGCC GCTGACGCGC GCGGTCAGCG ACGCGGTGCC GGTGCCGGTG
ATCGCCTCGG GCGGCGTCGG CGCGCTGGAG CACCTCGCCG AGGGCATCCA GGTCGGTGGC
GCCGATGCGG TGCTGGCCGC CAGCATCTTC CACTACGGCA CGTTCACCGT CGGCCAGGCC
AAGGCCTTGA TGGCCGAGCA CGGCATCCCC GTCAGGATGT AA
|
|---|
| Protein sequence | MLAKRIIPCL DVTGGRVVKG VNFVELRDAG DPVEIAARYN EQGADELTFL DITATSDGRD
LILPIIEAVA SQVFIPLTVG GGVRSVEDVR RLLNAGADKV SFNSAAVANP QLIRDASDKY
GAQCIVVAID AKARVGGEGW EVYTHGGRRN TGLDAVAWAQ QMAEFGAGEI LLTSMDRDGT
QIGFNLPLTR AVSDAVPVPV IASGGVGALE HLAEGIQVGG ADAVLAASIF HYGTFTVGQA
KALMAEHGIP VRM
|
|---|
| |