| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A0825 |
|---|
| Symbol | |
|---|
| ID | 4786960 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylibium petroleiphilum PM1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008825 |
|---|
| Strand | - |
|---|
| Start bp | 866098 |
|---|
| End bp | 866766 |
|---|
| Gene Length | 669 bp |
|---|
| Protein Length | 222 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640089386 |
|---|
| Product | TetR family transcriptional regulator |
|---|
| Protein accession | YP_001020022 |
|---|
| Protein GI | 124266018 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1309] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCCAC GGGTCCCGAA GAAAGCACCG CGCCGCACGG CCGAGCGCAT CCTGGAGGTG
ACGCTGGAAC TGTTCAACCG CTTCGGCGAG CCCAACGTCA GCACCACGCT GATCTCGGCC
GAGCTCAACA TCAGCCCCGG CAACCTCTAC TACCACTACC CGGCCAAGGA CGAGCTGATC
AACAGCCTGT TCGACCGCTA CGAGGCCGCG CTCACCGAGC TGCTGCGGGC GGCCGACAAC
GTGCGCAACG TCGAGGACGC CTGGCTGTTC TTCCACATGC TGTTCGAGCT GATCTGGCAG
TACCGCTTCC TGTACCGCGA CCTGAACGAC CTGCTCAGCA AGAACCGGCG CCTGGAGACC
CACTTCCAGT TCGTGCTGAA GAACAAGCAG CATGCGGTCA AGGCGGTGCT CGACGGCCTG
AGCCGCGCGC AGGCGATGCG CATCGACGCG CGCGAGGCCG AGCCGGTGGC CACCTCGATG
GTGGTGGTGC TGACCTACTG GCTCAGCTAC GAGTACGTGC GCGACCCGCG CAAGGCATTG
GAGCCCGAAA GCGCCGGCGC GGCGCTGCTG CGCGGCGCCC AGCACGTGCT CAGCCTGCTG
ATGCCCTACC TCGATCCGGG CCAGCGCGAG CACCTGCTGA TGCTGGCCGG CAGCTACCAG
CGCGACTGA
|
|---|
| Protein sequence | MSPRVPKKAP RRTAERILEV TLELFNRFGE PNVSTTLISA ELNISPGNLY YHYPAKDELI
NSLFDRYEAA LTELLRAADN VRNVEDAWLF FHMLFELIWQ YRFLYRDLND LLSKNRRLET
HFQFVLKNKQ HAVKAVLDGL SRAQAMRIDA REAEPVATSM VVVLTYWLSY EYVRDPRKAL
EPESAGAALL RGAQHVLSLL MPYLDPGQRE HLLMLAGSYQ RD
|
|---|
| |