| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A0776 |
|---|
| Symbol | |
|---|
| ID | 4784164 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylibium petroleiphilum PM1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008825 |
|---|
| Strand | - |
|---|
| Start bp | 810353 |
|---|
| End bp | 812152 |
|---|
| Gene Length | 1800 bp |
|---|
| Protein Length | 599 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 640089337 |
|---|
| Product | putative bifunctional OHCU decarboxylase/allantoate amidohydrolase |
|---|
| Protein accession | YP_001019973 |
|---|
| Protein GI | 124265969 |
|---|
| COG category | [E] Amino acid transport and metabolism
[S] Function unknown |
|---|
| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases
[COG3195] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | [TIGR01879] amidase, hydantoinase/carbamoylase family
[TIGR03164] OHCU decarboxylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACCACCG CTGCCCCCAC CCCGCTGACG CTCGCCTGGC TCAACGATGC GCCGGCCGAG
GCGGCGCTGG CCGCGCTCGA CGGGCTCTAC GAGCACTCGC CGTGGATTGC CGAGGCGGCA
CTGCGCCAGC GGCCATTCAC CAGCCTGGCG CAGCTCAAGC ATGCGATGGT GCGCGTGGTG
CGCGAGGCCG GGCGCGAGGC CCAGCTCGCG CTGGTGCGCG CCCACCCCGA GCTGGCGGGC
AAGGCCGCGG TGGCCGGCAC GCTGACCGCC GAATCGACCG GCGAGCAGGC GCGCGCCGGC
CTGAACCACT GCTCCCCGGA GGAGTTCGCG CTGGTGCAGC GGCTCAACGC CGAATACGGC
GCGCGCTTCG GCTGGCCCTT CGTGCTGGCG GTGCGCGGCC CGCGCGGCGA GGGCCTGCAC
CGGCGCGAGA TCCTCGCGAC GCTGCAGCGC CGGCTGCAGG GCCACCCCGA GATCGAGCTG
GTCGAGTGCC TGCGCAACAT CGACCGCATC GCCGAGATCC GCCTGAACGA CAAGTTCGGC
GCCGCGCCGA TCCTGGGCAA CCCGGTGTGG GACTGGGCCG AGCAGCTGGC CGTGCACACC
GACCCGGGCT ATGGCGAACG CGGCGAGCTC ACCGTCACTT ACCTGACCGA CGCGCACCGT
GCCTGCGCCG CGCAGCTGCA GGCCTGGATG CGCGACTGCG GCTTCGACGA GGTGCGCCTC
GATGCGGTCG GCAACGTGGT GGGCCTCTAC CTCGGCAGCG ATCCGTCGGC GCGGCGCCTG
CTCACCGGCA GCCACTACGA CACCGTGCGC AACGGCGGCA AGTACGACGG CCGGCTCGGC
ATCCTGGTGC CGATGGCCTG CGTGCGCGAG CTGCACCGCG CCGGCCGGCG CCTGCCCTTC
GGACTCGAGG TGGTCGGCTT CGCCGAAGAG GAGGGTCAGC GCTACAAGGC CACCTTCCTC
GGCTCCGGCG CGCTGACCGG CCACTTCGAG CCCGCCTGGC TGGACCAGCA GGACGCCGAC
GGCGTGACGA TGCGCACCGC GATGCTGGCC GCCGGCCTGC CGGCCACGCT GGAGGCGATC
GCGGCCGAGG CGCGCGATGC GGCGCGCTAC CTCGGCTTCG TCGAGGTCCA CATCGAGCAG
GGCCCGGTGC TCGCCGAGCT GGACCTGCCG CTGGGCGTGG TGAGCTCCAT CAACGGCAGC
GTGCGCTACC TCGGCGAGGT GGTCGGCGTC GCCAGCCACG CCGGCACCAC GCCGATGGAC
CGCCGGCGGG ATGCCGCCAC CGCGGTCGCC GAGTTGGCGC TCTACGTCGA GCAGCGCGCC
GCTGCGGCGC CGCACCTGGT CGGCACCGTC GGCATGCTGG AGGTGCCCAA CGGCTCGATC
AACGTCGTGC CGGGCCGTTG CCGTTTCAGC ATCGACATCC GCTCCACCAC CAACGAAGTG
CGCGACGCGA TGGCGGCCGA CGTGCGCGAG CGGCTGGCCG CGATCTGCGA GCGCCGCGGC
CTCGCCTACC GCCTCGAGGA AACCGTGCGC GCCGCGGCCG CCCCCAGCGA CGCCGCCTGG
CAGCGCCGCT GGGAGGCCGC CGTCGCCGCC ACCGGCCTGC CGGTGCACCG CCTGCCCAGC
GGCGCCGGCC ACGACGCGAT GAAGCTGCAC GAGGTGATGC CGCAGGCCAT GCTGTTCGTG
CGTGGCGAGA ACGCCGGCAT CAGCCACAAC CCGCTCGAAT CCACCACGGC CGACGACATG
CAGCTTGCGG TCGAGGCCTT CACGCACCTG CTCGACGCCC TGAGCCACGA CACGCCATGA
|
|---|
| Protein sequence | MTTAAPTPLT LAWLNDAPAE AALAALDGLY EHSPWIAEAA LRQRPFTSLA QLKHAMVRVV
REAGREAQLA LVRAHPELAG KAAVAGTLTA ESTGEQARAG LNHCSPEEFA LVQRLNAEYG
ARFGWPFVLA VRGPRGEGLH RREILATLQR RLQGHPEIEL VECLRNIDRI AEIRLNDKFG
AAPILGNPVW DWAEQLAVHT DPGYGERGEL TVTYLTDAHR ACAAQLQAWM RDCGFDEVRL
DAVGNVVGLY LGSDPSARRL LTGSHYDTVR NGGKYDGRLG ILVPMACVRE LHRAGRRLPF
GLEVVGFAEE EGQRYKATFL GSGALTGHFE PAWLDQQDAD GVTMRTAMLA AGLPATLEAI
AAEARDAARY LGFVEVHIEQ GPVLAELDLP LGVVSSINGS VRYLGEVVGV ASHAGTTPMD
RRRDAATAVA ELALYVEQRA AAAPHLVGTV GMLEVPNGSI NVVPGRCRFS IDIRSTTNEV
RDAMAADVRE RLAAICERRG LAYRLEETVR AAAAPSDAAW QRRWEAAVAA TGLPVHRLPS
GAGHDAMKLH EVMPQAMLFV RGENAGISHN PLESTTADDM QLAVEAFTHL LDALSHDTP
|
|---|
| |