| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A0675 |
|---|
| Symbol | |
|---|
| ID | 4784416 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylibium petroleiphilum PM1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008825 |
|---|
| Strand | - |
|---|
| Start bp | 711846 |
|---|
| End bp | 712448 |
|---|
| Gene Length | 603 bp |
|---|
| Protein Length | 200 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640089235 |
|---|
| Product | putative isochorismatase |
|---|
| Protein accession | YP_001019872 |
|---|
| Protein GI | 124265868 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG1335] Amidases related to nicotinamidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.286103 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCACCG CGTCCACCAC CTTGAGAGAT CTCGTCGGCC TCGGCCACCG TCCGGCCGCG
CTGGGCGAGG CCGCACTGAT CATGATCGAC TGCCAGAACA CCTACCGGCA GGGCGTGATG
CAGCTGACCG GCGTGGAAGA GGCGCTGGTC GAGGCGCGCA AGCTGCTGGA GATCGCCCGC
GCGCGCAGGA TGCCGATCTT CCACATCCAG CACGACGCCG GCGCCGGCTC GCCCTACGAC
GTGCGGGCCG AGATCGGCGC CATCTCGGCC GAGGTGGCTC CGATCGCCGG CGAGCCGGTC
ATCACCAAGC ACTACCCCAA CTCCTTCGTG CAGACCGACC TCGACGAGCG GCTGAAGGCG
CTGGGCATCC AGCAGATCGT GCTGGCCGGC TTCATGACGC ACATGTGCAT CAACTCCACC
GCGCACGGCG GCTTCAACCT CGGCTACGCG CCGACGGTGG TGGCCAGCGC CACCGCGACG
CGCGCGCTGC AGGGGCCGAA CGGCAAGGTG CTGACAGCGC GCGAGGTGCA CGACGGCGCG
CTGGCGTCCA CGCGCGACCT GTACGCGGCG GTGGTGGACT CGGTGGCCGA CCTCGGCAAC
TGA
|
|---|
| Protein sequence | MTTASTTLRD LVGLGHRPAA LGEAALIMID CQNTYRQGVM QLTGVEEALV EARKLLEIAR
ARRMPIFHIQ HDAGAGSPYD VRAEIGAISA EVAPIAGEPV ITKHYPNSFV QTDLDERLKA
LGIQQIVLAG FMTHMCINST AHGGFNLGYA PTVVASATAT RALQGPNGKV LTAREVHDGA
LASTRDLYAA VVDSVADLGN
|
|---|
| |