| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A0670 |
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| Symbol | |
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| ID | 4784410 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | + |
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| Start bp | 705817 |
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| End bp | 709329 |
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| Gene Length | 3513 bp |
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| Protein Length | 1170 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640089229 |
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| Product | sensor histidine kinase/response regulator |
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| Protein accession | YP_001019867 |
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| Protein GI | 124265863 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.315036 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGTCCC ACCCCGCCGC CCTGCCGCCT GCTTCCGACA CGCCGCCCGC CGCGCCGGTG
CAGCGCGTGA TCAAGCTGCG CCGCGACTAC AACAGCTGGG TCGCGCGCGA GACCATGGAG
GACTACGCGC TGCGCTTCAC GCCGCGCGCC TTCCGCAAGT GGTCGGCCTG GCGGGTGGCC
AACACCGCCA TCGGCGGCGC CGCGTCCTTC CTGGTGCTGG AGGCGGTGGG GGCCACGCTG
CTGGTCCAGC ACGGCTTCGT CAACGCGGCG CTGGCGATCC TGGTGACCGG CCTGGTGATC
TTCCTGGCCG GGCTGCCGGT CAGCGTCTAC GCGGCGCGTC ACGGCGTCGA CATGGACCTG
CTGACGCGCG GCGCCGGTTT CGGCTATATC GGCTCCACGC TCACCTCGCT GATCTACGCG
AGCTTCACCT TCATCTTCTT CGCGCTCGAG GCCGCGGTGA TGGCGTATGC GCTGGAGCTG
GCCTTCGATA TCCCGCCGGC CTGGGGCTAC CTGATCTGCG CGGTGGTCGT GATCCCGCTG
GTGACCCACG GCGTCACCGC GATCAGCCGG CTGCAGGTCT GGACCCAGCC GCTGTGGCTG
GCGATGCTGG TCGCGCCCTA TGTCTACGTG TTCGCCGAGA ACCCGGGCGT CGTCGACGGC
CTGCTCGCGT ACGGCGGCGA GAAGGGCGTG GCCGGCTTCT CGTGGCTGCA CTTCGGCGCG
GCCACCACGG TGGGCATTGC GCTCATCACG CAGATGGGCG AGCAGGCCGA CTACCTGCGC
TTCATGCCGG AGAAGCGCGC CGGCCAGCGC GGCCGCTGGT GGCTGGGCGT GCTGGTCGGC
GGGCCGGGCT GGGTGCTGCC GGGCGTGCTG AAGATGCTGG GCGGCACGCT GCTGGCGTGG
CTGGCCATCA GCCACATGGT GCCGCTGGAC CGCGCGGTCG ACCCCAACCA GATGTACCTC
GCGGCCTACG AGCACGTGTT CCCGCACTAC GGCCTGGCGG TCGCGGCGAC CGCGCTGTTC
GTCGTGATCT CGCAGCTCAA GATCAACGTC ACCAACGCCT ACGCCGGCTC GCTGGCCTGG
AGCAACTTCT TCGCGCGCCT CACCCACAGC CACCCGGGCC GCGTGGTGTG GATGGTGTTC
AACACCGCGA TCGCGCTGAT GCTGATGGAG CTCAATGTCT TCCAGGCCAT CGGCAGCGTG
CTCGGGCTGT ACAGCAACGT CGCGATCGCC TGGATGATGG CCGTGGTGGC CGACCTGGTG
GTCAACAAGC CACTGGGCCT GAGCCCGCCC GGCATCGAGT TCCGCCGCGC TCACCTCTAC
GACGTCAACC CGGTCGGCGT GGGTGCGATG GGCATCGCCT CGCTGCTGTC GATCACCGCG
CACATCGGCC TGTACGGACC CATGGCGCAG GCCTGGTCGG CGGCCATCGC GATGGTCACC
GCCTTCGCCG CCGCGCCGCT GATCGCCTGG GCCACGAAGG GCCGCTACTA CATCGCCCGC
CAGCCCGAGC CGCTGGCGGC CGGCGACGAT GGGCGTTACC CGCGCCTCAG CCGCTGCTGC
ATCTGCGAGC GTGAGTACGA GCGCGACGAC ATCGCCTCCT GCCCGGCCTA CGGCGGGCCG
ATCTGCTCGC TGTGCTGCAC GCTCGACGCG CGCTGCGGCG ACCTGTGCAA GCCGCCCGAG
GCCAAGCTCG CCGCGCAGTG GTCGGCGGCG CTGCGGCGCC TGCTGCCGCG CGCCGTGTGG
CCCTACATCG ACACCGGTCT GGGCCACTAC CTGCTGTTGA TGCTCACCGT GGTGCCGCTG
CTCGGCGGCC TGTTCGCGCT GCTCTACCAC CAGGAGCTGC GCACGCTGGC CGCCAGCGGC
GCGCCGCTCG CGCCGGCGGT GGCCGGTGCG TTGAAGCTGG GCTTCGTGAA GGCCTTCGCT
GCGCTGCTGC TGATCGCCGG GACCGTGGCC TGGTGGCTGG TGCTCACGCA CAAGAGCCGC
GAGGTCGCAC AGGAGGAGTC CAACCGCCAG ACCGCCGCGC TGCGCACCGA GATCGAGTCG
CACCGCCGCA CCGACGCGCA GCTGCAGGAG GCCAAGCTGC AGGCCGAGCG CGCGATGCAC
CAGGCCGAGC AGGCCAACCG CGCCAAGAGC CGCTACATCA CCGCCATCAG CCATGAGCTG
CGCACGCCGC TCAACAGCAT CCTCGGCTAT GCGCAGCTGC TGGAGGAGGA CGAGGCGATG
CCGCCGCACC GCGCGCAGGC GGTGCGCGTG ATCCGCCGCG GCGGGGACCA CCTCGCCAGC
CTGATCGAGG ACACGCTGGA CCTGGCGCGC ATCGAGAGCG GCAAGCTCGC GCTGGAGGTG
CGGCCGCTGC GGCTGTGCGA GGCGGTGCAG GAGCTCGCGC GCATGTTCGA GCTGCAGGCG
CGCGCCAAGG GCCTGGTGTT CCGCCACGAG ATCGAGGGCC CGGACGTGGT GCGCGCCGAC
GAGAAGCGGC TGCGCCAGAT CCTCATCAAC CTGCTCGGCA ACGCGGTGAA GTTCACCGCG
CAGGGCGAGG TGGTATTCCG CATGCGCTAC GCGCGCGAGA TCGCGCACTT CGAGATCGAG
GACTCGGGCC CCGGCATGAC GTCCGATGAG CTGGCGCGCG TGTTCGAACC CTTCGAACGC
GGCGGCGCGC TGGCCGGCGG CGGGCACGGC ACCGGCATCG GCCTCACCAT CGCGAAGATG
CTGACCGACC TGATGGGCGG CGAGATGACG GTGCGCAGCA CGCCCGGCCG CGGCACCGCC
TTCGCGATCC GGCTGTTCCT GCCGCAGGCC AGCGAGGCGA CGGTGGCGCC CGCGGTGCGC
GTGGCGCGCC GCATCGGCTA TGCCGGCGCG CGCCGCAGCG TGCTGGTGGT CGACAACGAG
GAGGCCGACC GCGGCCTGCT CGCCACGGTG CTGGAGCCGC TGGGTTTCGC GGTGCGCCAG
GCGGCCTCCG GCGAGGCGGC CCTGCGCTTG CTGCGCGCCG GCCCGCCGCC CGACGCCATC
CTGATGGACC TGGCCATGCC GGGGCTGGAC GGCTGGGCCA CGATCCGCCA GCTGCGCGAG
GAAGGCCTGT GCGAGGCGCC GGTGGCCATC GTCTCGGCCA ATGCCTTCGA CCGCGGGCTC
GACAACGACG TCGGCGTCAC GCCGGCCGAC TTCTTCGTGA AGCCGGTGCG CGTGACCGAC
CTGCTGCAGT GGCTGGGCCA GCGTCTGGCG CTCGAATGGA TCGATGCGCC ACCGCGCCAC
GCCACGGCCT CCGGCCCGCC GGCGCTCGCC ACGCCGGCCG GTCCGCTGCC GGTCGCCGCG
TTTGCGCGCC GCGCCGCGCT CGACGAACTG GCGCGGCTGG GCTACCTGCG CGGCCTGCTC
GGCGAGCTGA GCGCGATCGA GGCCGAGGAC CCGGCCGCCG CGGCCTGGAC CGGCCCGGTG
CGCGAGCTGG CCCAGCAGTT CCGCTTCGAC GCCATCCGTG CGCTGCTGAA TCCCCGAGAC
GAGGAACCCG AAGATGCTGC CGCGGCCGCC TGA
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| Protein sequence | MPSHPAALPP ASDTPPAAPV QRVIKLRRDY NSWVARETME DYALRFTPRA FRKWSAWRVA
NTAIGGAASF LVLEAVGATL LVQHGFVNAA LAILVTGLVI FLAGLPVSVY AARHGVDMDL
LTRGAGFGYI GSTLTSLIYA SFTFIFFALE AAVMAYALEL AFDIPPAWGY LICAVVVIPL
VTHGVTAISR LQVWTQPLWL AMLVAPYVYV FAENPGVVDG LLAYGGEKGV AGFSWLHFGA
ATTVGIALIT QMGEQADYLR FMPEKRAGQR GRWWLGVLVG GPGWVLPGVL KMLGGTLLAW
LAISHMVPLD RAVDPNQMYL AAYEHVFPHY GLAVAATALF VVISQLKINV TNAYAGSLAW
SNFFARLTHS HPGRVVWMVF NTAIALMLME LNVFQAIGSV LGLYSNVAIA WMMAVVADLV
VNKPLGLSPP GIEFRRAHLY DVNPVGVGAM GIASLLSITA HIGLYGPMAQ AWSAAIAMVT
AFAAAPLIAW ATKGRYYIAR QPEPLAAGDD GRYPRLSRCC ICEREYERDD IASCPAYGGP
ICSLCCTLDA RCGDLCKPPE AKLAAQWSAA LRRLLPRAVW PYIDTGLGHY LLLMLTVVPL
LGGLFALLYH QELRTLAASG APLAPAVAGA LKLGFVKAFA ALLLIAGTVA WWLVLTHKSR
EVAQEESNRQ TAALRTEIES HRRTDAQLQE AKLQAERAMH QAEQANRAKS RYITAISHEL
RTPLNSILGY AQLLEEDEAM PPHRAQAVRV IRRGGDHLAS LIEDTLDLAR IESGKLALEV
RPLRLCEAVQ ELARMFELQA RAKGLVFRHE IEGPDVVRAD EKRLRQILIN LLGNAVKFTA
QGEVVFRMRY AREIAHFEIE DSGPGMTSDE LARVFEPFER GGALAGGGHG TGIGLTIAKM
LTDLMGGEMT VRSTPGRGTA FAIRLFLPQA SEATVAPAVR VARRIGYAGA RRSVLVVDNE
EADRGLLATV LEPLGFAVRQ AASGEAALRL LRAGPPPDAI LMDLAMPGLD GWATIRQLRE
EGLCEAPVAI VSANAFDRGL DNDVGVTPAD FFVKPVRVTD LLQWLGQRLA LEWIDAPPRH
ATASGPPALA TPAGPLPVAA FARRAALDEL ARLGYLRGLL GELSAIEAED PAAAAWTGPV
RELAQQFRFD AIRALLNPRD EEPEDAAAAA
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