Gene Mpe_A0648 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpe_A0648 
Symbol 
ID4784775 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylibium petroleiphilum PM1 
KingdomBacteria 
Replicon accessionNC_008825 
Strand
Start bp682378 
End bp683346 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content63% 
IMG OID640089207 
Productsignal peptidase I 
Protein accessionYP_001019845 
Protein GI124265841 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0681] Signal peptidase I 
TIGRFAM ID[TIGR02227] signal peptidase I, bacterial type 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0465019 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.157314 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGCAT TGACCGGGCT GCTCTATGGC GCCCTCGTGG TTTACCTGGG CGGCTGGTAT 
CTCGGCTCCT GGAGCGGCAA CTTCTCGCTG CTGCTCTTCA TCCTGACGCT GGCGACCTTC
GGCTACTGGC TGGCCGAGCG CCTGCACTTC CTGCCGCGAC GCGTGGCGGC AGCCTCGGCA
CTGGAGGCGC AGGACGCGCA GCGGCGCAGC GAACTGCAGC GCCAGGGCAT CCAGCAGGTC
GATGGCAACG TGGCCGTGGC GCGGGAGCGC GTGTTGGCCC AGCCGTGGTG GCTGGACTGG
ACCGCGGGCC TGTTCCCGGT GATCCTGGCG GTCTTCCTGC TGCGCTCCTT CCTGTTCGAA
CCGTTCAAGA TTCCGTCAGG CTCCATGATC CCCACGCTGG CGATCGGCGA TCTCATCCTC
GTGAACAAGT TCCACTATGG GGTGAGGCTG CCGGTGATCA ACAAGAAGAT CCTCGCCAAC
AATGAGCCCC AGCGTGGCGA CGTGATGGTG TTTCGCTATC CGGTCGAGCC AGGTGTCGAC
TACATCAAGC GCGTGGTCGG TCTGCCGGGT GATGAAGTGG CCTACCTGAA CAAGAAGCTC
TCGATCAATG GTCAGCCGGT GGAAACACGG CCGCTGCCGG ATTTCTATGA CGAGGACTCG
CTGCGCTATG CCCAGCAGGC AAGTGAAAAG CTCGGCGCCG TCGAGCACCG CATCCTGACC
GACAAGGACC GTCCCGGCTT CGTGATCCCG ATGCCCCAGT TCCAGAACTT CCGCGACAAC
TGCCGCTACA ACGCCGAAGG CGTGGTGTGC ACCGTGCCCC CGGGCCACTA CTTCATGATG
GGCGACAACC GGGACAATTC GCAGGATTCG CGCTACTGGG GCTTCGTGCC CAACGAGAAC
ATCGTCGGCA AGGCCTTCTT TGTCTGGATG AATTTCGGTA ACCTCAGGCG AATCGGCTCC
TTCCATTGA
 
Protein sequence
MSALTGLLYG ALVVYLGGWY LGSWSGNFSL LLFILTLATF GYWLAERLHF LPRRVAAASA 
LEAQDAQRRS ELQRQGIQQV DGNVAVARER VLAQPWWLDW TAGLFPVILA VFLLRSFLFE
PFKIPSGSMI PTLAIGDLIL VNKFHYGVRL PVINKKILAN NEPQRGDVMV FRYPVEPGVD
YIKRVVGLPG DEVAYLNKKL SINGQPVETR PLPDFYDEDS LRYAQQASEK LGAVEHRILT
DKDRPGFVIP MPQFQNFRDN CRYNAEGVVC TVPPGHYFMM GDNRDNSQDS RYWGFVPNEN
IVGKAFFVWM NFGNLRRIGS FH