| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A0643 |
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| Symbol | |
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| ID | 4784770 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | + |
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| Start bp | 676685 |
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| End bp | 677329 |
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| Gene Length | 645 bp |
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| Protein Length | 214 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 640089202 |
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| Product | putative transmembrane sigma-E factor negative regulatory transcription regulator protein |
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| Protein accession | YP_001019840 |
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| Protein GI | 124265836 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3073] Negative regulator of sigma E activity |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.483517 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.192651 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAATG TCGAGAACCT GCAGGGGGCC GAGGCCCTTT CGGCCCTGGT CGATGGCGAG
GCCGACGCCG GCACGGCGGC CTCGCTCAGC GCGCGCTGGC GTGACGAGGC GGCTTTGCGC
GAACGCTGGC ACAGCTACCA GCTGATCGGT GACGTGCTGC GCTCCGAGGA GCTCGCCGGC
GGGGGGCGCG ACGCGGCGTT CCTTCAGCGT CTGCGCGCGC AGCTCGACCG GGAGCCGGTC
GTTCTGGCGC CCCGGGCCGA TCGGGTGGCC GAGGAGTCCG CTGCGGCGTT GCCCAGGCAG
CGGGCCGCTG GTGGGGGATT GCGCCGCTGG GCCACGCCGG CCGCAGTGGC GGCGGGTTTC
CTGGCCGTGA TCGGGTCGTT GGCCGTGACC CGCCTGTCGG GGCCGCAGGC GGACGCGCCG
CAGCTGGCGC AGGCGCCAGT GGTGCCGGCC GAGGCGCCCC AGCGGGTCGT CCTGTCCGCG
CCCGCCGATC AGGTCGAGCC TGCCAGCGGC GTGCTGATCC GCGATGCCCG CCTCGATCAG
TATCTGGCGG CGCACAAGCA GTTCGGTGGC AGCTCGGCCT TGAGCGTGCC GTCGGGTTTC
CTGCGCAGCG CGACCTACGA CGGCGCCACG GCGGCCGCGC GCTGA
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| Protein sequence | MSNVENLQGA EALSALVDGE ADAGTAASLS ARWRDEAALR ERWHSYQLIG DVLRSEELAG
GGRDAAFLQR LRAQLDREPV VLAPRADRVA EESAAALPRQ RAAGGGLRRW ATPAAVAAGF
LAVIGSLAVT RLSGPQADAP QLAQAPVVPA EAPQRVVLSA PADQVEPASG VLIRDARLDQ
YLAAHKQFGG SSALSVPSGF LRSATYDGAT AAAR
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