| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A0642 |
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| Symbol | |
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| ID | 4784769 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | + |
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| Start bp | 676026 |
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| End bp | 676646 |
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| Gene Length | 621 bp |
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| Protein Length | 206 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640089201 |
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| Product | RNA polymerase sigma factor RpoE |
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| Protein accession | YP_001019839 |
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| Protein GI | 124265835 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02939] RNA polymerase sigma factor RpoE |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.514045 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.189477 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGGCTGAGC CGACCAGTCC TGACAACGAC GCCCTGCTGG TCGACCGCGT CAAGCAGGGC
GACGTACGCG CCTTCGAGAT GCTGGTCGTC AAGTACCAGC GGCGGATCGA GCGCCTGATC
GGGCGCATGG TGCGCGACGT CGACCTGGTC CAGGACATCG CGCAGGAGAC CTTCATCCGC
GCCTACCGGG CGATCCCGCA GTTCCGTGGC GAGAGCCAGT TCTACACCTG GCTGTACCGG
ATCGCGGTCA ACACGGCCAA GAAGACCCTC GGCGACCTGA AGCGAGACCT GCTCGTGACC
GAATCGGCAC GGGCCGGCCG GGACGAGGAC GGCGATGAAA CTTCCCGGGT CGAGAACGAA
CTAACCGACG GCGAGACGCC TGACGCCTTG CTGGCATCGA AACAGATCGC CAATGCGGTG
AACTCCGCGA TCGAGGATCT GTCCGAAGAT CTGAGGCAGG CGATCACGCT GCGCGAGATC
GAAGGCCTGA GCTACGAAGA GATCGCTGAC GTGATGAATT GCCCGATCGG GACGGTGCGG
TCGCGCATTT TCCGGGCGCG CGAGGCGATC GCGGAGCGTT TGCGCCCGAT GCTGGAGCAG
CGCTCCGGCG AGCGCTGGTG A
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| Protein sequence | MAEPTSPDND ALLVDRVKQG DVRAFEMLVV KYQRRIERLI GRMVRDVDLV QDIAQETFIR
AYRAIPQFRG ESQFYTWLYR IAVNTAKKTL GDLKRDLLVT ESARAGRDED GDETSRVENE
LTDGETPDAL LASKQIANAV NSAIEDLSED LRQAITLREI EGLSYEEIAD VMNCPIGTVR
SRIFRAREAI AERLRPMLEQ RSGERW
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