| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A0625 |
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| Symbol | |
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| ID | 4785192 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | - |
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| Start bp | 659896 |
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| End bp | 660450 |
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| Gene Length | 555 bp |
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| Protein Length | 184 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640089184 |
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| Product | dTDP-4-dehydrorhamnose 3,5-epimerase |
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| Protein accession | YP_001019822 |
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| Protein GI | 124265818 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes |
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| TIGRFAM ID | [TIGR01221] dTDP-4-dehydrorhamnose 3,5-epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.508465 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGGTGA GCCCCACGGC CCTGCCCGAG GTCTTGTTGT TCGAACCCGA TATGTTTCGG
GATGCACGCG GGTTCGTCGT GGAAAGCTTC AACCAGCGTG CGTTCGAAGC GGCAGTGGGT
CACGCCGCGA ACTTCGTGCT GGACGTCCAC TCCCGCTCGC AGCGCGGGGT GCTGCGGGGT
CTGCACTACC AGCGTCCACC GCATACCCAG GCCAAGCTGG TACGTGTGAG CGTCGGCAGT
GTGTACGACG TTGCCGTGGA TCTGCGCCGG AGCAGCCGGT GCTTCGGTCA ATGGACAGGC
ATCGAGCTCA GTGCCGAGCG CGCACAACAG CTCTGGATTC CGCAGGGTTT TGCACACGGC
TTCCTGGTGC TGAGCGAATC GGCAGAAGTG CAATACAAGG CGACCAACTA CTACGAGTCG
CATGCGGAAG GAGCCATACG GTGGGACGAC CCATTGATTG ATATCAAGTG GCCGGCGCTA
GACATCCAGC CGCTACTGTC TTTAAAGGAC GCTGCCGCGC CGACGTTGGC GCAAGCGAGC
GTGCTGTTCG AATAG
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| Protein sequence | MKVSPTALPE VLLFEPDMFR DARGFVVESF NQRAFEAAVG HAANFVLDVH SRSQRGVLRG
LHYQRPPHTQ AKLVRVSVGS VYDVAVDLRR SSRCFGQWTG IELSAERAQQ LWIPQGFAHG
FLVLSESAEV QYKATNYYES HAEGAIRWDD PLIDIKWPAL DIQPLLSLKD AAAPTLAQAS
VLFE
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