Gene Mpe_A0577 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpe_A0577 
SymbolfliR 
ID4785263 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylibium petroleiphilum PM1 
KingdomBacteria 
Replicon accessionNC_008825 
Strand
Start bp607489 
End bp608259 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content67% 
IMG OID640089136 
Productflagellar biosynthesis protein 
Protein accessionYP_001019774 
Protein GI124265770 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1684] Flagellar biosynthesis pathway, component FliR 
TIGRFAM ID[TIGR01400] flagellar biosynthetic protein FliR 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.778054 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCACCT TCGACGAGGC CCAGCTCACC GCGTGGCTGA GCCCGATGGT CTGGCCCTTC 
CTGCGGGTGC TGGCGCTGTT CATCAGCGCC CCGGTGCTGA GCATGCGCAG CGTGCCGGTG
CGGGTGAAGG TGGCGCTGGC CTTCTTCATC ACCATCGCGG CCCAGGCCTC GCTGCCGCCG
ATGCCGGTGA TCGCGCTCGA CAGCGCACAG GCCTTCGAGG CGGTGATCCA GCAGCTGGTG
ATCGGACTGG CCCTCGGCTT CTCGGCGCGC ATCGTCATGG CCGGCATCGA GTTCGCCGGC
GAGATGATCG GTCTGCAGAT GGGCCTGAAC TTCGCGGCCT TCTTCGATCC CATCAGCGCC
TCGCAATCCA CCGCGGTCAG CCGCTTCTTC GGCACCAGCG CAGCCTGGCT GTTCGTCGTG
ATGAACGGTC ACCTGCTGCT GACCGCGGCC GTGATCCAGA GCTTCCATGC CTTCCCGGTG
GCCACGCCCG AGGCCGCACC GCTCGCCTTC CTGTCGGCCC TGCAACCGCA GCTCTGGGGC
GCGGAGGTGT TCCGCCTCGG GCTGTGGATC GCGCTGCCGA TCATCACGAT GCTGCTGTTC
ATGAACCTCG TGCTGGGCCT GATCTCGCGC GTGGCCTCGC AGATCAACAT CTTCGCGATC
GGCTTCCCGA TCACGCTCGG CGTCGGCCTG GTCGGCATCA CGCTGACCCT GCCCTTCATG
GAACAGCCGT TCACGATGGC GCTGGAGCGG ATGCTGGCGC AGTTCCAGTA G
 
Protein sequence
MFTFDEAQLT AWLSPMVWPF LRVLALFISA PVLSMRSVPV RVKVALAFFI TIAAQASLPP 
MPVIALDSAQ AFEAVIQQLV IGLALGFSAR IVMAGIEFAG EMIGLQMGLN FAAFFDPISA
SQSTAVSRFF GTSAAWLFVV MNGHLLLTAA VIQSFHAFPV ATPEAAPLAF LSALQPQLWG
AEVFRLGLWI ALPIITMLLF MNLVLGLISR VASQINIFAI GFPITLGVGL VGITLTLPFM
EQPFTMALER MLAQFQ