| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A0565 |
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| Symbol | fliF |
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| ID | 4785251 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | + |
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| Start bp | 596477 |
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| End bp | 598180 |
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| Gene Length | 1704 bp |
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| Protein Length | 567 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640089124 |
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| Product | flagellar biosynthesis lipoprotein |
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| Protein accession | YP_001019762 |
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| Protein GI | 124265758 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1766] Flagellar biosynthesis/type III secretory pathway lipoprotein |
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| TIGRFAM ID | [TIGR00206] flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF) |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACACCG CACTTGCCCC CGTGAATTCC CTGCCGCTCA CGCCGGCCAA CGCCGACGGC
TTTGGCTCGC GCCTCGCTGC GCTGCCCGCC GGCCGCAAGT TCACGCTCGG CATCGGCCTG
GCCGCGCTGG TGGGCATCGC CTTCGCGATG TCGATGTGGT CTTCGCAGGG CAACTACAAG
GTGCTGTACG CCGGCCTGTC CGACAAGGAC GGTGGCGCGA TCCTGGCCCA GCTGTCGACG
ATGAACGTGC CCTACAAGCA CGCCGACGGC GGCGCCGCGA TCCTGGTGCC GGCCGACAAG
GTGCACGACG TGCGCCTGAA GCTGGCCTCG GCCGGCCTGC CCAAGGGCTC GATCGTCGGC
TTCGAGCTGA TGGACAACGC CAAGTTCGGC CAGACGCAGT TCCAGGAGCG CCTGACCTTC
CAGCGCGGTC TCGAGGGCGA GCTGACCCGC TCGATCGGTG CGCTGGCCGC GGTGCAGAGC
GCCCGCGTTC ACCTCGCGCT GCCCAACCAG AACGGCTTCT TCCGCGAACA GCAGAAGCCC
AGCGCCTCGG TGCTGCTGAC GCTGCACCCC GGCCGCACGC TCGACCGCAC GCAGATTGCC
GGCATCGTTC ACCTCGTGTC GTCGAGTGTC CCCGAGATGG ACCCGAAGGC GGTGACCGTG
CTCGACGCCA CCGGCGCGCT GATCTCCGGC GCCGGCGACG CCGGTTCGGC CGGCGGCCTG
GACGCCCAGC AACTGCAGTA CGTGGGCCAG ATCGAGGGCA ACTACACCAA GCGCGTGTTC
GACATCCTCG AGCCGGTGCT GGGCCGCGAC AACCTGCGCG CCCAGGTCAC CGCCGAAGTC
GATTTCTCGC AGACCGAATC CACCTCCGAG GCCTATGCGC CGAACCAGGG CCTGGGCGCC
GACGGCAAGC CGGCCGCGGC CACCCTGCGC AGCCACCAGG TCAGCGAGGC CAGCGGCGGC
GGCAGCGCCC AGCCGGCCGG CGTGCCCGGC GCCGCCAGCA ACCAGCCGCC GGTGCCGGCC
ACCGCGCCGG TCAACGGCAG TGCGCAGCCG CTGCAGACCG CGCAGTCGGG CGGCGGCAGC
GGCGGTAACA GCCGGCGCGA GGCCACCACC AACTACGAGG TCGACAAGAC CGTGCGCGTC
ACGCGCAACG CTACCGGCAC CATCAAGCGC CTGAACGCGG CGGTGGTGCT GAACCACCGC
TCGGTGACCG ACGCCAAGGG CAAGACCAGC ACCACGCCGA TCTCGGCCGA GGAGATGGAA
AAGCTCACCG CGCTGGTCAA GGAGACCATC GGCTTCAACG CCGACCGCGG TGACTCGGTG
AAGCTGATCA ACGCGCCCTT CAAGGTCGAG AAGCCGCCGG TCGAGGAAGC ACTGCCGCTG
TGGAAGCAGC CCGAGACCCA GGATCTGCTG CGCACGCTGG CCGTGCCGGG CGCGCTGACG
CTGCTGGCGA TGATCATCGT GTTCGGTGCG GTGCGGCCGG CGCTGAAGGC GGCCCAGCCG
GCCCAGCCGC AGCGCCAGCT CGACGCCGTG GTCGACGACG TGCCGGCGCT GCCGTCCCCG
TCGTCGGCCC AGGCCGCGGC CCTGCCCGCG CTCGAGGCGC CGGTGGTGGA CACGCGGCTG
AACCAGGCCC GTGCGCTCGC CAAGGAAAAC CCGGCGGCCA TGGCCAACAT CGTGCGCGGC
TGGTCCGCCA AGGAGGCCGC ATGA
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| Protein sequence | MDTALAPVNS LPLTPANADG FGSRLAALPA GRKFTLGIGL AALVGIAFAM SMWSSQGNYK
VLYAGLSDKD GGAILAQLST MNVPYKHADG GAAILVPADK VHDVRLKLAS AGLPKGSIVG
FELMDNAKFG QTQFQERLTF QRGLEGELTR SIGALAAVQS ARVHLALPNQ NGFFREQQKP
SASVLLTLHP GRTLDRTQIA GIVHLVSSSV PEMDPKAVTV LDATGALISG AGDAGSAGGL
DAQQLQYVGQ IEGNYTKRVF DILEPVLGRD NLRAQVTAEV DFSQTESTSE AYAPNQGLGA
DGKPAAATLR SHQVSEASGG GSAQPAGVPG AASNQPPVPA TAPVNGSAQP LQTAQSGGGS
GGNSRREATT NYEVDKTVRV TRNATGTIKR LNAAVVLNHR SVTDAKGKTS TTPISAEEME
KLTALVKETI GFNADRGDSV KLINAPFKVE KPPVEEALPL WKQPETQDLL RTLAVPGALT
LLAMIIVFGA VRPALKAAQP AQPQRQLDAV VDDVPALPSP SSAQAAALPA LEAPVVDTRL
NQARALAKEN PAAMANIVRG WSAKEAA
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