| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A0556 |
|---|
| Symbol | |
|---|
| ID | 4785242 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylibium petroleiphilum PM1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008825 |
|---|
| Strand | - |
|---|
| Start bp | 588079 |
|---|
| End bp | 588936 |
|---|
| Gene Length | 858 bp |
|---|
| Protein Length | 285 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640089115 |
|---|
| Product | putative lipoprotein |
|---|
| Protein accession | YP_001019753 |
|---|
| Protein GI | 124265749 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.921395 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.957276 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGAGAGGTT GGAGAATTAT CGCGGCCTGT GTACTGTTGG CACTGGGCGG CTGCAGCGCG
CTGCGGTTGG CTTACACGCA GGCCGGGGAG TTTGCATACT GGTGGCTCGA CGGCTACGTC
GATTTCAACG GCGATCAGAC GCTGCGCACG CGCGACGCGA TCACCCGGTG GTTCGCCTGG
CATCGCAGGA CCGAGTTGCC GGACTATGTG GCGCTGCTCG ACCGCGCGGC GGCCGAGGCC
GGCCAGGACG CCACGCCCGC CCAGGCCTGC CGCTGGTTCG ACGAGGTGCG CCTGCGCATC
GATCGCGCCG TCGACCACGC ACTGCCCGAC ACCGCAGCCA TTGCCATGAG CTTCAGCCCG
GAGCAATTGA ATCGCCTGGA ACGCAAGCAG GCGAAGAACA ACGCCGAGTT CCGAGACGAC
TTCCTGCAGC CCGACCCGGC CGAGCGGCGC GCGGCGGCGG TCGAGCGCGT GGTCGATCGG
GCCGAGCAGC TGTATGGCCG GCTCGACCGC TTGCAGCGCG AGCGCATCGC GCAATCCTTG
AGCAAATCGC CGTTCGAGCC GGAACGCTGG CTGGCCGAGC GGCAGCGTCG GCAGCGCGAC
CTGCTGCTGA TCCTGCGGCA GGCGCAGTCC GGCGCACTGT CGGTCACCTC GGCCACCGAC
GCACTGCGGA CTCACTGGCA AGAGGTCAAG CGCTCGCCGG ACGACGCCTA CCAGAGCTAC
CAGCGTCGCC TCGACGCGGC GAACTGCGAA CTGCTCGCGC AGATCCACAA CCGCACGACG
CCCGAGCAAC GGCACGAGGC CCAGCGCAAG CTCAGAGGGT GGGCGGCCGA CCTGCGGCGT
CTCGCGACGC CCGCCTGA
|
|---|
| Protein sequence | MRGWRIIAAC VLLALGGCSA LRLAYTQAGE FAYWWLDGYV DFNGDQTLRT RDAITRWFAW
HRRTELPDYV ALLDRAAAEA GQDATPAQAC RWFDEVRLRI DRAVDHALPD TAAIAMSFSP
EQLNRLERKQ AKNNAEFRDD FLQPDPAERR AAAVERVVDR AEQLYGRLDR LQRERIAQSL
SKSPFEPERW LAERQRRQRD LLLILRQAQS GALSVTSATD ALRTHWQEVK RSPDDAYQSY
QRRLDAANCE LLAQIHNRTT PEQRHEAQRK LRGWAADLRR LATPA
|
|---|
| |