Gene Mpe_A0552 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpe_A0552 
Symbol 
ID4785238 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylibium petroleiphilum PM1 
KingdomBacteria 
Replicon accessionNC_008825 
Strand
Start bp585299 
End bp586078 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content72% 
IMG OID640089111 
Productputative oxidoreductase protein 
Protein accessionYP_001019749 
Protein GI124265745 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.404038 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGTCG ATTCCCGTCC CGTGGTGCTC GTCACCGGTG CCGCACGGCG CGTCGGCCGC 
GCCATCGCGC TCGAACTGGC CGCGCACGGC TTCGACGTGG CGGTGCACAG CCATCGGGCC
AGCGACGAGT CGATCGACAC GCTGCAGGCA GCCCGCGCGG CCGGTGCGCG CGCCGAGGCT
TTCGTGGCCG ACCTGGCCGA CGAGACCGCC TGCCGCGCGC TGCTGCCTGC CGTGGCCGAG
CGCATGGGGC GCATCGACGC GGTGGTGAAC AACGCCTCGC GCTTCGAGTA CGACGGCGCA
GGGGACTGCA GCTACGCGTC GATGGCCGAG CACTGGCAGG TCAACACCGC CGCGCCGGTG
CTGCTGGCGG CCGCGCTGCA CCAGCGGCTG AGCGGTAGCT CGGGGCGTGG CTGTGTCGTC
AACCTGCTCG ACCAGAAGCT GTGGAACCCG AATCCGGATC ATTTTTCGTA CACGCTGTCG
AAGGCCGCGC TGGAGGCGGC GACCACGCTG CAGGCGCAGG CCTTCGCGCC CACGCTGCGC
GTGGTTGGTG TTGCGCCCGG CGTCACGCTG CCGTCGGGAC CGATGGACAG CGCGGAGTTC
GTGCGCGCAC ACGCGATGAC GCCGCTGCGC CGTTCGTCGA CGCCCGAGGA CGTGGCTCGT
GCCGTGCGCT TCCTGATCGA GTCGCCGGCC ATCACCGGCA CCACGCTGCT GGTCGACGGC
GGGCAGCACC TGTCTGCGCA GCCGCGCGAC GTGCTGTTCC TTGCGCGCGA GGGGGTTTGA
 
Protein sequence
MSVDSRPVVL VTGAARRVGR AIALELAAHG FDVAVHSHRA SDESIDTLQA ARAAGARAEA 
FVADLADETA CRALLPAVAE RMGRIDAVVN NASRFEYDGA GDCSYASMAE HWQVNTAAPV
LLAAALHQRL SGSSGRGCVV NLLDQKLWNP NPDHFSYTLS KAALEAATTL QAQAFAPTLR
VVGVAPGVTL PSGPMDSAEF VRAHAMTPLR RSSTPEDVAR AVRFLIESPA ITGTTLLVDG
GQHLSAQPRD VLFLAREGV