Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpe_A0552 |
Symbol | |
ID | 4785238 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylibium petroleiphilum PM1 |
Kingdom | Bacteria |
Replicon accession | NC_008825 |
Strand | + |
Start bp | 585299 |
End bp | 586078 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640089111 |
Product | putative oxidoreductase protein |
Protein accession | YP_001019749 |
Protein GI | 124265745 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.404038 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGTCG ATTCCCGTCC CGTGGTGCTC GTCACCGGTG CCGCACGGCG CGTCGGCCGC GCCATCGCGC TCGAACTGGC CGCGCACGGC TTCGACGTGG CGGTGCACAG CCATCGGGCC AGCGACGAGT CGATCGACAC GCTGCAGGCA GCCCGCGCGG CCGGTGCGCG CGCCGAGGCT TTCGTGGCCG ACCTGGCCGA CGAGACCGCC TGCCGCGCGC TGCTGCCTGC CGTGGCCGAG CGCATGGGGC GCATCGACGC GGTGGTGAAC AACGCCTCGC GCTTCGAGTA CGACGGCGCA GGGGACTGCA GCTACGCGTC GATGGCCGAG CACTGGCAGG TCAACACCGC CGCGCCGGTG CTGCTGGCGG CCGCGCTGCA CCAGCGGCTG AGCGGTAGCT CGGGGCGTGG CTGTGTCGTC AACCTGCTCG ACCAGAAGCT GTGGAACCCG AATCCGGATC ATTTTTCGTA CACGCTGTCG AAGGCCGCGC TGGAGGCGGC GACCACGCTG CAGGCGCAGG CCTTCGCGCC CACGCTGCGC GTGGTTGGTG TTGCGCCCGG CGTCACGCTG CCGTCGGGAC CGATGGACAG CGCGGAGTTC GTGCGCGCAC ACGCGATGAC GCCGCTGCGC CGTTCGTCGA CGCCCGAGGA CGTGGCTCGT GCCGTGCGCT TCCTGATCGA GTCGCCGGCC ATCACCGGCA CCACGCTGCT GGTCGACGGC GGGCAGCACC TGTCTGCGCA GCCGCGCGAC GTGCTGTTCC TTGCGCGCGA GGGGGTTTGA
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Protein sequence | MSVDSRPVVL VTGAARRVGR AIALELAAHG FDVAVHSHRA SDESIDTLQA ARAAGARAEA FVADLADETA CRALLPAVAE RMGRIDAVVN NASRFEYDGA GDCSYASMAE HWQVNTAAPV LLAAALHQRL SGSSGRGCVV NLLDQKLWNP NPDHFSYTLS KAALEAATTL QAQAFAPTLR VVGVAPGVTL PSGPMDSAEF VRAHAMTPLR RSSTPEDVAR AVRFLIESPA ITGTTLLVDG GQHLSAQPRD VLFLAREGV
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