| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A0540 |
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| Symbol | |
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| ID | 4787363 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | - |
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| Start bp | 577080 |
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| End bp | 578246 |
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| Gene Length | 1167 bp |
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| Protein Length | 388 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640089099 |
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| Product | putative major capsid protein |
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| Protein accession | YP_001019737 |
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| Protein GI | 124265733 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4653] Predicted phage phi-C31 gp36 major capsid-like protein |
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| TIGRFAM ID | [TIGR01554] phage major capsid protein, HK97 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.272419 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGACGA TTGCAGACAT CGCCGAAGAG CTCGACAAAA GCAACAAGTC CCTTGAGGCT
TGGCGCGACA GGAAAGACAA GGAATTCGAG GAAGTGCGGC AGTTGGTTCA AGACTTCGCC
AAGAAGTCGA ACCGCCCCGG TGCCGGCTTC GCGTCGCCGA TGCCTCTGTC GGACGCTCAG
CGCAAGTCGC TCGATCTCGG CGCTCGTGCC CTGATCGCAG GCGACCAGGC CCGCGCTGAG
AAGCACTTCG TCGAGGCCAA GGCCATGCAC ACCGGCAACG ACCCGGCCGG CGGCTACATG
GTGCTGCCTC AGATGTCGGA CGAGGTCACG CGGGTGATGC TCGAAACCTC GCCGCTACTG
AGTTCGGTTC GCCTCGTGGA TCTCGAGCCG ACCGACGAGT TCGAAGAGAT CGTCGACCGC
GACGAGGTGG GCGTCACCTG GGTGGGCGAG CTAGACAGTC GCTCCGAGAC CACGGCGCCG
GCCCTGGGTA AGTTCATCGT GCCGCTGCAT GAGGTGTACG CGATGCCGGC CGTGAGCCAG
AAGCTAATCG ACACCGCGTC GTTCAACGTG ATGGACTGGC TCAACACCAA GATCGGCGAG
AAGTTCGGCT TCTCGTTCGG CGCGTCGATC ATCGCTGGTG ACGGCGCCGC GAGACCGTCC
GGGTTCACCA ACTACCCGAT CGCCGCCACG GCTGATGCCA CGCGCCCCTG GGGCACGCTG
CAGTACCTGC CGACCGGCAC CGATGGCGCT TTCAACAGCA CCACGAAGAC GGACGTTCTG
GTGGACACGG TGGCCGCTCT CAAGCCGCAG TACCGCACCG GCGCTTCCTG GGTGATGAAC
CGCTCCACCG CGGCGACGCT GCGCAAGCTC AAGACGACCG ACGGCGAATC GCTCTGGGCC
GCGTCGACCA CGGCTGGCCT GCCGTCCACG CTGCTGGGCT ACCCCGTGAT CGAAGACGAC
CAGATGGCAT CGATCGCGAC GAACTCGCTG TCGATCGCCT TCGGCAACTT CCGGCGCGGC
TACACGTTCG TTCGTCGTCT GGGCACACGC TTCCTGGTGG ACCCGTACAC CAACAAGCCC
AAGGTGAACC TGTACGCCTA CCAGCGTGTC GGTGGCGCTG TCGCCAACTT CGAAGCGATC
AAGCTGGTTC GCTTCTCTGC AGCCTGA
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| Protein sequence | MMTIADIAEE LDKSNKSLEA WRDRKDKEFE EVRQLVQDFA KKSNRPGAGF ASPMPLSDAQ
RKSLDLGARA LIAGDQARAE KHFVEAKAMH TGNDPAGGYM VLPQMSDEVT RVMLETSPLL
SSVRLVDLEP TDEFEEIVDR DEVGVTWVGE LDSRSETTAP ALGKFIVPLH EVYAMPAVSQ
KLIDTASFNV MDWLNTKIGE KFGFSFGASI IAGDGAARPS GFTNYPIAAT ADATRPWGTL
QYLPTGTDGA FNSTTKTDVL VDTVAALKPQ YRTGASWVMN RSTAATLRKL KTTDGESLWA
ASTTAGLPST LLGYPVIEDD QMASIATNSL SIAFGNFRRG YTFVRRLGTR FLVDPYTNKP
KVNLYAYQRV GGAVANFEAI KLVRFSAA
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