| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A0532 |
|---|
| Symbol | |
|---|
| ID | 4787355 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylibium petroleiphilum PM1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008825 |
|---|
| Strand | - |
|---|
| Start bp | 568381 |
|---|
| End bp | 569754 |
|---|
| Gene Length | 1374 bp |
|---|
| Protein Length | 457 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640089091 |
|---|
| Product | (dimethylallyl)adenosine tRNA methylthiotransferase |
|---|
| Protein accession | YP_001019729 |
|---|
| Protein GI | 124265725 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0621] 2-methylthioadenine synthetase |
|---|
| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01574] tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.742382 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGCCG CCGGCACCGG CAAGAAGGTC TTCATCAAGA CCTTCGGTTG CCAGATGAAC
GAGTACGACT CGGACAAGAT GGCCGACGTG CTGCGCGCGG CCGAGGGCTA TGAGCCCACG
ACCGACGTGG AGCAGGCCGA CCTGATCCTC TTCAACACCT GCTCCGTGCG CGAGAAGGCA
CAGGAGAAGG TGTTCAGCGA CCTGGGGCGC GTGAAACACC TGAAGGCCAG GGGCGTGAAG
ATCGGCGTGG GCGGCTGCGT TGCCAGCCAG GAAGGCGCGG CACTGATCGA GCGTGCGCCT
TACGTCGACG TGGTGTTCGG TCCGCAGACG CTGCACCGCC TGCCGGAAAT GCTGGCTCGT
CGCGATGCGC AGCAGCGCCC GCAGGTCGAC ATCAGCTTCC CCGAGATCGA GAAGTTCGAC
CATCTGCCGC CGGCGCGCGT CGACGGCGCG ACCGCCTTCG TCTCGATCAT GGAAGGCTGC
TCCAAGTACT GCAGCTACTG CGTCGTGCCC TACACGCGCG GCGAGGAAGT GTCGCGGCCG
TTCGACGACG TTCTCACCGA AGTGGCCAGC CTGGCCGACC AGGGCGTCAA GGAAGTGACG
CTGCTGGGCC AGAACGTCAA CGGCTACCGC GGCCGCATGG GCGACACGGC CGAGATCGCC
GACTTCGCGC TGCTGCTGGA GTACGTGGCG GAGATCCCGG GCATCGCCCG CATCCGCTAC
ACCACCAGCC ATCCGAACGA GTTCTCGCAG CGGCTGATCG ACGTGTACGC CCGCGTGCCG
CAGCTCGTGA ACCACCTGCA CCTGCCGGTG CAGCACGGCA GCGACCGCAT CCTGAGCGCG
ATGAAGCGCG GCTACACGTC GCTGGAGTAC AAGTCTTCGA TCCGCAAGCT GCGCGCGATC
CGGCCCGACA TCAGCCTGTC GACCGACTTC ATCGTCGGCT TCCCCGGCGA GACCGATGAC
GACCACGCGC GCACGATGAA GTTGATCGAG GACGTGGGCT TCGACCACAG CTTCAGCTTC
ATCTACAGCG CCCGCCCCGG CACGCCGGCC GCGGCACTGC ACGACGACGC GCCGCGCGAA
CTCAAGCTGG CCCGTTTGCA GCAGGTGCAG GAAGCGATCG AGGCTAACGG CCGGCGCATC
GGCCAGAGCC GCGTCGGCAC CGTGCAGCGC ATCCTCGTCG AAGGGCCGTC GCGCCGGCCT
GAGCTCAATG CCGGCCACGA GTTGATGGGC CGCACCGAGT GCAACCGCAT CGTCAACTTC
GCCGGTCCGG CCCGCCTGAC CGGACAGCTG ATCGACGTGA CGATCACCGA GGCCTACCCG
CACTCGCTGC GCGGCGAGGT GCTGCTGCGG GAGCGCAGCC CGCAGCCGGC CTGA
|
|---|
| Protein sequence | MSAAGTGKKV FIKTFGCQMN EYDSDKMADV LRAAEGYEPT TDVEQADLIL FNTCSVREKA
QEKVFSDLGR VKHLKARGVK IGVGGCVASQ EGAALIERAP YVDVVFGPQT LHRLPEMLAR
RDAQQRPQVD ISFPEIEKFD HLPPARVDGA TAFVSIMEGC SKYCSYCVVP YTRGEEVSRP
FDDVLTEVAS LADQGVKEVT LLGQNVNGYR GRMGDTAEIA DFALLLEYVA EIPGIARIRY
TTSHPNEFSQ RLIDVYARVP QLVNHLHLPV QHGSDRILSA MKRGYTSLEY KSSIRKLRAI
RPDISLSTDF IVGFPGETDD DHARTMKLIE DVGFDHSFSF IYSARPGTPA AALHDDAPRE
LKLARLQQVQ EAIEANGRRI GQSRVGTVQR ILVEGPSRRP ELNAGHELMG RTECNRIVNF
AGPARLTGQL IDVTITEAYP HSLRGEVLLR ERSPQPA
|
|---|
| |