Gene Mpe_A0531 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpe_A0531 
Symbol 
ID4787354 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylibium petroleiphilum PM1 
KingdomBacteria 
Replicon accessionNC_008825 
Strand
Start bp567718 
End bp568362 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content69% 
IMG OID640089090 
Producthemolysin III 
Protein accessionYP_001019728 
Protein GI124265724 
COG category[R] General function prediction only 
COG ID[COG1272] Predicted membrane protein, hemolysin III homolog 
TIGRFAM ID[TIGR01065] channel protein, hemolysin III family 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.666008 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCCTGC CCGAGCGCCC ACAGACTGCC GCCGAGGAGT TGGCCAACGC GGTCAGTCAT 
GGCCTCGGGC TGCTGCTGGC GCTGGCGTCC TTGCCGGTGG TCGTGGAGTT CGCGGCGCGG
CACGGCAGCC CGGTGAAGCT GGTCGGCGTC AGCGTGTTCT CGGCGACGAT GATCCTGGTG
TACTTCGCGT CCGCGCTGTA TCACGCGCTG CCGCCGGGGC GGGCCAAGCG ATGGTGCAAC
ACGCTGGATC ATGTGGCGAT CTACCTCTTC ATCGCAGGCA GCTACACACC GGTCGCGCTG
GGCCGGCTGC CCGACGGGCC GGGCTGGACG CTGCTGGGTC TGGTGTGGGC GCTGGCCGTC
ATCGGCGCCT TGCTCAAGAT CACCCGGCGG CTGGCGAATC CATTGCTGTC GACCGCGCTC
TACGTGGCGA TGGGCTGGCT CGCAGTGTTT GCCGCCGGCC CGGTGTTGCG CGACCTGCCG
CTGGGCATGC TGGCCTGGCT GCTGGCGGGC GGCCTGGCCT ACCTGGTGGG CGTCGTGTTC
TTCGTGCTCG ACTCGCGTCT GCGCTTCGGG CACTTCGTCT GGCACCTGTT CGTGCTGGCC
GGCAGCACCT GCCACTTCTT TGCGGTGCTG GGGCCGGCCG TCTGA
 
Protein sequence
MVLPERPQTA AEELANAVSH GLGLLLALAS LPVVVEFAAR HGSPVKLVGV SVFSATMILV 
YFASALYHAL PPGRAKRWCN TLDHVAIYLF IAGSYTPVAL GRLPDGPGWT LLGLVWALAV
IGALLKITRR LANPLLSTAL YVAMGWLAVF AAGPVLRDLP LGMLAWLLAG GLAYLVGVVF
FVLDSRLRFG HFVWHLFVLA GSTCHFFAVL GPAV