| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A0517 |
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| Symbol | |
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| ID | 4787093 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | + |
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| Start bp | 555190 |
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| End bp | 556935 |
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| Gene Length | 1746 bp |
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| Protein Length | 581 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640089076 |
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| Product | prolyl-tRNA synthetase |
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| Protein accession | YP_001019714 |
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| Protein GI | 124265710 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0442] Prolyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00409] prolyl-tRNA synthetase, family II |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0801971 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGCCT CCCAGTTCTT CGTCTCCACC TTGAAAGAAG CACCGGCCGA CGCCGAGATC
ACGAGCCACA AGCTGATGAT GCGCGCCGGC ATGATCAAGC GGCTCGGAGC CGGCATCTAC
AGCTACATGC CGATGGGGCT GCGCGTGATC CGCAAGGTCG AGGCGATCAT CCGCGAGGAA
ATGAACCGGG CGGGCGCCGT CGAACTGCTG ATGCCCGTGG TGCAGCCGGC CGAGCTGTGG
CAGGAGACCG GTCGCTTCGA GAAGATGGGG CCCGAGCTGA TGCGCGTGAA GGACCGCCAC
GACCGCGACT TCATCATCCA GCCGACCAGC GAGGAGGTCG TCACCGACAT CGCGCGGCAG
GAACTGCGCA GCTACCGTCA GCTGCCGAAG AATTTCTATC ACATCCAGAC CAAGTTCCGT
GACGAGCGAC GGCCGCGCTT CGGCGTGATG CGCGGGCGCG AGTTCACCAT GAAGGATGCC
TACTCCTTCG ACCGTGATGA AGCGGCTGCC GGCAGGAGCT ACGACGCGAT GTACGCTGCC
TACGGACGCA TCTTCGACCG TTTCGGCCTC AGCTACCGTG CGGTGGCGGC CGACACCGGC
GCGATCGGTG GCGACCGCTC GCACGAGTTC CAGGTCATCG CCGAGACGGG TGAGGATGCG
ATCGTCTACT GCCCGACCAG CGATTACGCG GCCAACATCG AGCTGGCCGA GTGTCTGCCG
CTCGCCGCGC AACGGCCGGT GCCGATTCAG CCGCTGACCA AGACGCCGAC GCCCGGCAAG
GCGACCTGCG CCGATGTGGC GGCCCTGCTG AATCTGCCGC TGACGCAGAC AGTGAAATCG
CTGGTGCTGG CGACTGACGA TCGCAATGAC GGCGGCGACA TCGTCAAGAC CACCGTCTGG
CTGCTGCTGG TGCGGGGCGA TCATGAGCTC AATGAGGTCA AGGCCGGCAA GCTGCCAGGC
CTGAAGGCGG GCTTTCGCTT CGCGACCGTC GGTGAGATCG ATGCGCACTT CGGCTGCAAG
CCGGGCTACC TGGGACCGAT CGGCCTGAAG CAGCCGGTGC GTGTGATCGC CGACCGGACG
GTGGCGCACA TGGGCGACTT CGTCTGCGGC GCCAACGACG CCGACTTCCA CTACACCGGC
GTCAACTGGG GCCGCGACCT GCCCGAGCCC GACCTCGTGG CCGACATCCG CAATGCCGTC
GTGGGCGACC CTTCGCCGGA CGGCAAGGGC GTGCTGGCGA TCCAGCGTGG TATCGAGGTC
GGCCACGTGT TCTACCTCGG CACCAAGTAC AGCGCCGCGA TGAACGCCAC CTACCTCGAT
GAGACCGGTA AGCCGCGGCT GATGGAGATG GGCTGCTACG GCATCGGCGT CACGCGCATC
CTCGGCGCGG CGATCGAGCA GCGCCACGAC GCGCGAGGCA TCGTGTGGCC GACCGCGATC
GCGCCCTTCG AGGTGGTCAT CTGCCCGATC GGTTACGACC GTTCGGCCGA GGTCAGGCAG
GCCGCCGACA CTCTGCACGA CGAACTGCAG GCACTCGGCA TGGACTTGAT GCTCGACGAC
CGCGGTGAGC GTCCCGGTGC CATGTTCGCC GATTGGGAAC TGATCGGCAT TCCGCAGCGC
GTGGTGATCT CGGACCGCGG GCTGAAGGAG GGGCAGGTCG AGTTGCAGGG CCGGCAGGAG
GCCGAGGCCG GCAAGCTGGC AGTCGCCGAG GTGGTCGCGC AGTTGCGTGC GCGCTTGCGC
GACTGA
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| Protein sequence | MKASQFFVST LKEAPADAEI TSHKLMMRAG MIKRLGAGIY SYMPMGLRVI RKVEAIIREE
MNRAGAVELL MPVVQPAELW QETGRFEKMG PELMRVKDRH DRDFIIQPTS EEVVTDIARQ
ELRSYRQLPK NFYHIQTKFR DERRPRFGVM RGREFTMKDA YSFDRDEAAA GRSYDAMYAA
YGRIFDRFGL SYRAVAADTG AIGGDRSHEF QVIAETGEDA IVYCPTSDYA ANIELAECLP
LAAQRPVPIQ PLTKTPTPGK ATCADVAALL NLPLTQTVKS LVLATDDRND GGDIVKTTVW
LLLVRGDHEL NEVKAGKLPG LKAGFRFATV GEIDAHFGCK PGYLGPIGLK QPVRVIADRT
VAHMGDFVCG ANDADFHYTG VNWGRDLPEP DLVADIRNAV VGDPSPDGKG VLAIQRGIEV
GHVFYLGTKY SAAMNATYLD ETGKPRLMEM GCYGIGVTRI LGAAIEQRHD ARGIVWPTAI
APFEVVICPI GYDRSAEVRQ AADTLHDELQ ALGMDLMLDD RGERPGAMFA DWELIGIPQR
VVISDRGLKE GQVELQGRQE AEAGKLAVAE VVAQLRARLR D
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