| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A0508 |
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| Symbol | pilC |
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| ID | 4787105 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | - |
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| Start bp | 546037 |
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| End bp | 547263 |
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| Gene Length | 1227 bp |
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| Protein Length | 408 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640089066 |
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| Product | pilus tip-associated protein |
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| Protein accession | YP_001019705 |
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| Protein GI | 124265701 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1459] Type II secretory pathway, component PulF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.139168 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCACAG CAGCAACGGC TTCGGCGCGA GACATCAAGG AATTCGTCTT CGAGTGGGAA
GGCAAGGACA AGAACGGCAA GGTCGTGCGC GGCGAGATGC GAGCCGGCGG CGAGTCGGTC
GTCAGCGCGT CCCTGCGCCG CCAGGGCATC CTCGTCAACA AGGTGAAGAA GCGCCGCATG
AGCGGCGGCA AGTCCATCAA GCCGAAGGAT ATTGCGATCT TCACGCGCCA GATCGCGACG
ATGATGCGCG CCGGCGTTCC CTTGCTGCAG TCCTTCGACA TCGTCGCGCG GGGCAGCACC
AACCCTCGCG TGACCAAGCT GCTGACCGAC ATCCGCTCCG ACATCGAGAC CGGCACCAGC
CTGTCGTCGG CCTTCCGCAA GCACCCGCTG TACTTCGACG CGCTCTACTG CAACCTCGTC
GAGGCCGGTG AAGCCGCAGG TATCCTGGAA ACACTGCTCG AGCGGCTGGC GACCTACCAG
GAGAAGACGC TCGAGATCAA GCGCAAGATC AAGTCGGCGC TGATCTACCC GGTGGCCGTG
CTGGTGGTGG CCTTCGTGGT CGTCGCGGTC ATCATGATCT TCGTGATCCC GGCCTTCAAG
GAAGTCTTCA CGTCCTTCGG AGCCGACCTC CCGGCCCCGA CGCTGTTCGT GATGTCCATG
TCCGAGATCT TCGTCAGCTA CTGGTGGCTG ATCTTCGGCG TCATCATCGG CGGCACCTAC
TTCTTCTTCG AGTCGTGGAA GCGATCCGAG AAGATGCAGA AGACCATGGA CAGGCTGCTG
TTGAAGCTGC CGGTGTTCGG TGATCTGATC TTCAAGTCGG CCGTCGCTCG CTGGACGCGC
ACGCTCGCCA CGATGTTCGC GGCCGGCGTA CCGCTGGTCG AGGCGCTCGA CTCGGTCGGT
GGCGCCTCTG GCAATGCCGT GTTCGCCGAA GCGACGGAGC AGATCCAGAA GGACGTCTCC
ACCGGCACGG CACTGACCAC CTCGATGCAG GCGACCGGCA TCTTCCCCGT GATGGTGCTG
CAGATGGCTG CCATCGGTGA GGAATCGGGC GCCCTCGATC ACATGCTGTC CAAGGCTGCC
GAGTTCTACG AGGCCGAGGT CGATGAGGCC GTCAAGGGCC TGTCGAGCCT GCTCGAGCCG
ATCATCATCG TCGTGCTGGG CACCATCATC GGCGGCATCG TGGTCTCGAT GTACCTGCCG
ATCTTCAAGC TCGGCCAGGT GGTCTGA
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| Protein sequence | MATAATASAR DIKEFVFEWE GKDKNGKVVR GEMRAGGESV VSASLRRQGI LVNKVKKRRM
SGGKSIKPKD IAIFTRQIAT MMRAGVPLLQ SFDIVARGST NPRVTKLLTD IRSDIETGTS
LSSAFRKHPL YFDALYCNLV EAGEAAGILE TLLERLATYQ EKTLEIKRKI KSALIYPVAV
LVVAFVVVAV IMIFVIPAFK EVFTSFGADL PAPTLFVMSM SEIFVSYWWL IFGVIIGGTY
FFFESWKRSE KMQKTMDRLL LKLPVFGDLI FKSAVARWTR TLATMFAAGV PLVEALDSVG
GASGNAVFAE ATEQIQKDVS TGTALTTSMQ ATGIFPVMVL QMAAIGEESG ALDHMLSKAA
EFYEAEVDEA VKGLSSLLEP IIIVVLGTII GGIVVSMYLP IFKLGQVV
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