| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A0494 |
|---|
| Symbol | |
|---|
| ID | 4787079 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylibium petroleiphilum PM1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008825 |
|---|
| Strand | - |
|---|
| Start bp | 535465 |
|---|
| End bp | 535941 |
|---|
| Gene Length | 477 bp |
|---|
| Protein Length | 158 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 640089052 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001019691 |
|---|
| Protein GI | 124265687 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3019] Predicted metal-binding protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.132085 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAACACC CCCCGAAAGC CGACCGCCGC CGCACCCTGA CCCGCCTGTG TGCGCTGCTC
GCGATACCGG TCCTGCCCGC GTCGGCCGAG CCCGGCCGGC CGCTGATCGA CGTCTGGAAG
AGCCCGACCT GCGGCTGCTG CAAGGACTGG ATCCGGCATC TCGAAGCCCA CGGCTTCATG
GTGCGGGCCC ACGACGACGG CAACACCGAT GCGCGAGCCC GCCTGGGCAT GCCGCTGCGC
TACGGCTCGT GCCACACCGC GAGCGTGGGC GGCTATGCGA TCGAGGGCCA TGTGCCGGCG
CGCGAGGTGC GGCGACTGCT GAGGGAGCGG CCACAGGCCG TGGGGCTGGC CGTGCCGGCC
ATGCCGATCG GTTCGCCCGG CATGGACGGC CCGGAGTACG GCGGCCGCCG AGATCCCTAC
GAGGTACTGC TGGTGCAGCG CGACGGCCGT TCGGCCGTCT ACCAGGCCTA CCCCTGA
|
|---|
| Protein sequence | MQHPPKADRR RTLTRLCALL AIPVLPASAE PGRPLIDVWK SPTCGCCKDW IRHLEAHGFM
VRAHDDGNTD ARARLGMPLR YGSCHTASVG GYAIEGHVPA REVRRLLRER PQAVGLAVPA
MPIGSPGMDG PEYGGRRDPY EVLLVQRDGR SAVYQAYP
|
|---|
| |