| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A0491 |
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| Symbol | |
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| ID | 4787076 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | + |
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| Start bp | 531967 |
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| End bp | 533973 |
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| Gene Length | 2007 bp |
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| Protein Length | 668 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640089049 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_001019688 |
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| Protein GI | 124265684 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities
[COG3320] Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0442129 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGTATT TCGTCACCGG GGCCACCGGC TTCATCGGCA AGCGGCTGGT CAGGAAACTG
CTCGACCGGC GCGGCTCGAC CGTGCACTTC CTGTTGCGGC CCGAGAGCGA GGGCAAGCTG
CCCGAACTGC TGGCCTACTG GGGCCTCAGC GGCGCTGCCA AGGCCCGCGC GGTGCCGGTC
TACGGCGACC TGACGGCGAA GAAGCTGGGG GTGGCCGCCG ATGCAATCAA GGCGCTGAAG
GGTCGCATCG ATGCGATCTA CCACCTCGCC GCGGTCTATG ACCTGGGCGC CGACGAGGCC
GCGCAGGTGC AGGTCAACAT CGAGGGAACG CGCAGCGCGG TGGAGTTCGC GCAGGCGATC
CAGGCCGGGC ATTTCCACCA CGTCTCGTCG ATCGCGGCGG CCGGGCTGTA CGAGGGCGTG
TTCCGCGAGG ACATGTTCGA TGAAGCCGAG GGCCTGGACC ATCCGTACTT CATGACCAAG
CACGAGTCCG AGAAGATCGT GCGCAAGGAA TGCAAGCTGC CGTGGACCGT GTTCCGCCCG
GCGATGGTGG TCGGCGACTC CGCCACCGGC GAGATGGACA AGATCGACGG CCCCTACTAT
TTCTTCAAGC TGATCCAGCG CATGCGCCAG TTGCTGCCGC CCTGGATGCC GGCGGTGGGG
CTGGAGGGCG GGCGCGTGAA CATCGTGCCG GTGGACTTCG TCGTCGCGGC GCTCGACCAC
ATCAGCCATG CGAAGCTGGA GCTCGACCGC AAGTGCTTCC ACCTGGTCGA CCCGGTCGGC
TACCGCGTCG GCGACGTACT CGACATCTTC AGCAAGGCCG CCCATGCACC GAAGATGAAC
CTGTTCGTCA ACGCGGCGCT GCTGGGCTTC ATTCCCAAGA GCGTGAAGAA GGGCCTGATG
GCGCTGGCGC CGGTGCGCCG GGTGCGCAAC GCGGTGATGA AGGACCTGGG GCTGCCCGAG
GACATGCTGA CCTTCGTCAA TTACCCGACG CGCTTCGACT GCCGCGACAC GCAGGCGGCG
CTGAAGGGCA GCGGCATCGC CTGCCCCAAC CTGAAGGACT ACGCCTGGCG CCTGTGGGAC
TACTGGGAGC GCCACCTCGA TCCCGATCTG TTCATCGACC GCAGCCTGCG CGGCACGGTC
GGCGGCAAGG TGGTGCTGGT CACGGGCGGC AGCTCGGGCA TCGGCCTGGC GGCTGCCTGC
AAGTTCGCCG AGGCCGGCGC GGTGACGGTG ATCTGTGCGC GAGACGCCGA CAAGCTCGAC
GAGGCCGTGA AGGAGATCAA GGCCTTCGCC GGCAAGGACG CCAAGGTGTT CAGTTACTCG
GTCGACATCG CCGACGAGGC CGGCTGCAAG AGCTTCCTCG AGGCACTGCA CGCCGAGCAC
GGTGGCGTCG ATTTCCTGAT CAACAACGCC GGCCGATCGA TCCGCCGCGC GATCGAGAAC
AGCTACGAGC GCTTCCACGA CTTCGAGCGC ACGATGCAGC TCAACTACTT CGGCTGTCTG
CGGGTGACGA TGGGCGTGCT GCCGGCCATG GTCGCCAAGA AGAAGGGCCA CATCGTGAAC
ATCAGCTCGA TCGGCGTGCT GACCAATGCG CCCCGCTTCT CGGCCTATGT GGCGAGCAAG
GCCGCGCTGG ACGCGTGGAC GCGCTGTGCG TCCAGCGAGT ACGCCGACAC CGGCATCAGC
TTCACGACCA TCAACATGCC GCTGGTGCGC ACGCCGATGA TCGCGCCGAC CAAGATCTAC
AACAACGTCC CGACGCTGGC ACCCGAGGAG GCGGCCGACA TGATCGCCCA GGCCTGCGTC
TACAAGCCGG TGCGCATCGC CACGCGCCTG GGCACTGCCG GGCAGGTGCT GCACGCGCTG
GCGCCGCGCG TCGCGCAGAT CGTCATGAAC ACCAGCTTCC GCATGTTTCC CGACAGCGAA
GCGGCCAAGG GCGAGAAGGG CGCGAAGCCG CAGCTGTCGG CCGAGGCGGT GGCGCTGCAG
CAGATGATGC GCGGCATCCA CTTCTGA
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| Protein sequence | MQYFVTGATG FIGKRLVRKL LDRRGSTVHF LLRPESEGKL PELLAYWGLS GAAKARAVPV
YGDLTAKKLG VAADAIKALK GRIDAIYHLA AVYDLGADEA AQVQVNIEGT RSAVEFAQAI
QAGHFHHVSS IAAAGLYEGV FREDMFDEAE GLDHPYFMTK HESEKIVRKE CKLPWTVFRP
AMVVGDSATG EMDKIDGPYY FFKLIQRMRQ LLPPWMPAVG LEGGRVNIVP VDFVVAALDH
ISHAKLELDR KCFHLVDPVG YRVGDVLDIF SKAAHAPKMN LFVNAALLGF IPKSVKKGLM
ALAPVRRVRN AVMKDLGLPE DMLTFVNYPT RFDCRDTQAA LKGSGIACPN LKDYAWRLWD
YWERHLDPDL FIDRSLRGTV GGKVVLVTGG SSGIGLAAAC KFAEAGAVTV ICARDADKLD
EAVKEIKAFA GKDAKVFSYS VDIADEAGCK SFLEALHAEH GGVDFLINNA GRSIRRAIEN
SYERFHDFER TMQLNYFGCL RVTMGVLPAM VAKKKGHIVN ISSIGVLTNA PRFSAYVASK
AALDAWTRCA SSEYADTGIS FTTINMPLVR TPMIAPTKIY NNVPTLAPEE AADMIAQACV
YKPVRIATRL GTAGQVLHAL APRVAQIVMN TSFRMFPDSE AAKGEKGAKP QLSAEAVALQ
QMMRGIHF
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