| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A0476 |
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| Symbol | |
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| ID | 4784195 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | - |
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| Start bp | 515914 |
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| End bp | 517770 |
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| Gene Length | 1857 bp |
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| Protein Length | 618 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640089034 |
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| Product | quinoprotein alcohol dehydrogenase |
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| Protein accession | YP_001019673 |
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| Protein GI | 124265669 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4993] Glucose dehydrogenase |
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| TIGRFAM ID | [TIGR03075] PQQ-dependent dehydrogenase, methanol/ethanol family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0260666 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAAGC ATCCCGTCCG TCACGCCCTG TCCGTCGCAG CGGCGCTGGC CGTCCTGGGA
CTGTCCCAGG GTGCGCACGC CGTCAAGAAC GTCACCTGGG AAGACATCTC GAACGACGAC
CGCACGAGCA CCGACGTCCT GAGCTACGGT CTGGGCCTGA AGGCCCAGCG CTACAGCCCG
CTGAAGCAGA TATCGACCGC CAACGTGCAG AAGCTCGTCC CGGCATGGAG CCACTCCTTC
GGCGGCGAGA AGCAGCGCGG CCAGGAAGGC CAGGTGCTGG TGCATGACGG CGTGATCTAC
GCGACCAGTT CCTACTCTCG CTTCACGGCG CTCGACGCGA AGACCGGCCG GCAGCTGTGG
ACCTACGAAC ACCGCCTGCC CGACGATATC CGTCCGTGCT GCGACGTCGT CAACCGCGGC
CCCGCCATCT ACGGCGACAA GGTCTACTTC GGTACGCTCG ACGCACGCGT CGTGGCGCTG
GACCGCGCCA CCGGCAAGGT GGTGTGGAAC GAGAAGTTCG GTGACCACAA GGTGGGCTAC
ACGATGACCG GCGCGCCCTT CATCGTGAAG GACAAGAAGT CCGGTCGCGT GCTGCTGATC
CACGGCTCGT CGGGCGACGA GTTCGGCGTC GTCGGATGGC TGTTCGCACG CGATCCCGAC
ACCGGCGCCG AGGTCTGGGC TCGCCCGATG GTCGAGGGCC ACATGGGCCG CCTGAACGGC
AAGGACAGCA CGGTGACCGG CGATGCGAAG GCCCCCTCGT GGCCGCGTGA CAAAGACGGC
AAGCTGGTCG AGGCGTGGCA CCAGGGCGGC GGCGCGCCGT GGCAGACCGC GTCGTTCGAT
GCCGAGAACA ACACCATCGT GATCGGCACC GGCAACCCGG CGCCGTGGAA CACCTGGAAG
CGCACGAAGG AAGGCGACGA CCCGCGCAAC TGGGACAGCC TGTTCACCTC GGGTCAGGCC
TACGTCGATG CGTCGACCGG CGAACTCAAG GGCTTCTTCC AGCACACGCC GAACGATGCC
TGGGACTTCT CGGGCAACAA CTCGATCGTG CTGTTCGAGT ACAAGGACCC GAAGTCCGGC
AAGCTGGTGA AGGCCGGCGC GCATGCCGAC CGCAACGGCT TTTTCTTCGT GACCGACCGC
GAGAAGCTCG CGACCGGCGC CGGCTATCCG AACAAGCCGA CCGCGCTGCT CGGTGCGTGG
CCGTTCGTCG ACGGCATCAC CTGGGCCAAG GGTTTCGACC TGAAGACCGG CAAGCCGATC
GAGAACAACA ACCGTCCGCC GGCCCCCAAG CCCGGCGCCG ACAAGGGCGA GTCGATCTTC
GTGTCGCCGC CGTTCCTGGG CGGCACCAAC TGGATGCCGA TGAGCTACAG CCCGGACACC
GGCCTGTTCT ACATCCCGGC GAACCACTGG GCGATGGACT ACTGGACCGA GCACCTGACC
TACAAGGCCG GCTCGGCCTA CCTCGGCCAG GGCTTCCGCA TCAAGCGGCT GTACGAGGAC
CACGTCGGCA CGCTGCGGGC AATCGACCCG GTGACCGGCA AGATCGCGTG GGAACACAAG
GAGAAGCTGC CGCTGTGGGC CGGCACGATG ACGACGGCCG GCGGCCTGCT GTTCACCGGC
ACCTCCGACG GCTACGTGAA GGCCTTCGAC AGCAAGACCG GCAAGGAACT GTGGAAGTTC
CAGACCGGCT CGGGCGTGGT CTCGGTCCCG GTGACCTGGG AGCAGGACGG CGAGCAGTAC
GTCGGCATCC AGTCGGGCTA CGGCGGCGCC GTGCCCCTGT GGGGCGGTGA CATGGCCGAG
ATGACCAAGA AGGTCACGCA GGGCGGCTCG ATGTGGGTCT TCAAGCTGCC CAAGTAG
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| Protein sequence | MSKHPVRHAL SVAAALAVLG LSQGAHAVKN VTWEDISNDD RTSTDVLSYG LGLKAQRYSP
LKQISTANVQ KLVPAWSHSF GGEKQRGQEG QVLVHDGVIY ATSSYSRFTA LDAKTGRQLW
TYEHRLPDDI RPCCDVVNRG PAIYGDKVYF GTLDARVVAL DRATGKVVWN EKFGDHKVGY
TMTGAPFIVK DKKSGRVLLI HGSSGDEFGV VGWLFARDPD TGAEVWARPM VEGHMGRLNG
KDSTVTGDAK APSWPRDKDG KLVEAWHQGG GAPWQTASFD AENNTIVIGT GNPAPWNTWK
RTKEGDDPRN WDSLFTSGQA YVDASTGELK GFFQHTPNDA WDFSGNNSIV LFEYKDPKSG
KLVKAGAHAD RNGFFFVTDR EKLATGAGYP NKPTALLGAW PFVDGITWAK GFDLKTGKPI
ENNNRPPAPK PGADKGESIF VSPPFLGGTN WMPMSYSPDT GLFYIPANHW AMDYWTEHLT
YKAGSAYLGQ GFRIKRLYED HVGTLRAIDP VTGKIAWEHK EKLPLWAGTM TTAGGLLFTG
TSDGYVKAFD SKTGKELWKF QTGSGVVSVP VTWEQDGEQY VGIQSGYGGA VPLWGGDMAE
MTKKVTQGGS MWVFKLPK
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