| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A0433 |
|---|
| Symbol | |
|---|
| ID | 4785423 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylibium petroleiphilum PM1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008825 |
|---|
| Strand | + |
|---|
| Start bp | 471798 |
|---|
| End bp | 473837 |
|---|
| Gene Length | 2040 bp |
|---|
| Protein Length | 679 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640088991 |
|---|
| Product | putative cytochrome c-type biogenesis transmembrane protein |
|---|
| Protein accession | YP_001019630 |
|---|
| Protein GI | 124265626 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1333] ResB protein required for cytochrome c biosynthesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.265528 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.13422 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGGTTCT CGATCACGCT GCTGACCGTG ATCTGCATCG CCTCGGTCAT CGGTACCGTG
CTGCGGCAGC ACGAGTCGAT GAACAACTAC GTGAACCAGT TCGGGCCGTT CTGGGCGCAG
GTGTTCGACG CACTCGACCT CTATGCGGTC TACAGCGCCT GGTGGTTCCT GCTGATCCTG
GCCTTCCTGG TCGCGTCGAC CAGCCTGTGC ATCGCGCGCA ACGCGCCGAA GATCCTGGTC
GATCTCAAGG CCTACAAGGA GCAGATCCGC GCGAGCAGCC TCAAGTCCTT CCATCACCGC
GCCGAGGGCA CACTCGCCGC GCCACGCGCC GAGGTGCTGG ACCGCGTGTC GGCGTTGCTG
GTCGCTGGCG GCTGGAAGGC CAAGCTGCAG GAACGCGAGG GCGGCGTGAT GGTGGCGGCC
CGAAAGGGCG CTGCCAACAA GCTCGGCTAT CTGGCCGCGC ACTCGGCGAT CGTGCTGATC
TGCATCGGCG GCCTGTTCGA CGGTGACCTG GTGGTGCGTG CGCAGATGGC GCTGTTCGAC
AAGTCCGCCT GGCCCGGGGC CGGCCTGCTG CGCAACGTGC CGGCCGAGCA TGTGCTCTCC
GAGGGCAACC CGACCTACCG CGGCAACATC CTGGTCGGCG AAGGCCAGCG TGGCGGCACC
GCGGTGATCC AGCTGAAGGA CGGCGTGGTG CTGCAGCCGC TGCCGTTCGA CATCGAGCTG
AAGAAGTTCC TGGTCGACTT CTACCCGACC GGCATGCCCA AGCGATTCGC CAGCGACATC
GTGCTGCACG ACCGCGACAC CGGCGCCACC CGCACCGCGA CCGTGAAGGT CAACGAGCCG
GTGCAGCACC GCGGCGTGAT GATCTACCTG TCGAGCTTCG AGGACGGCGG CTCCAAGCTC
AAGCTCCGGG GCTGGCCGCT GGGCGGCGGG ACGCCGTTCC AGATGGACGG CGAGGTCGGC
ACCGAGACCA AGATCCAGAG CGAGCGCGAC GGCCAGACGC TCGGCCTCGA GTTCACCGGC
CTGCGCGTCA TCAACGTCGA GAACCTCACG GCCGTCGATG CGAGCGGCGG CACCGACGTG
CGCAAGGTCG ATCTCGTCAA CCGGCTCGAG AGCCACCTCG GTTCCGGCGC GAAGACGCGA
ACCGAGAAGA CGCTGCAGAA CGTCGGGCCG TCGATCAGCT ACAAGCTGCG CGACGCGGCC
GGCCAGGCCC GCGAGTACAA CAACTACACG CTGCCGCTCA CGCTCGATGG CCAGCGCGTC
TTCCTCGCTG GGGTGCGTGA GACGCCCAAC GAGCCATTCC GCTACCTGCG CATTCCGGCC
GACGATGCCG ACGGCCTGGC CGGCTGGATG CGGCTGCGCG GCGGCCTCAA CGAGCGGGCG
TTGCGCGAGG CCGCGGTGCA GCGCTACGTG GCCCGCGCCA CGCCGGCCGA CAAGCCCGAA
CTGGCGGAGC AACTGACAGT ATCGGCGCGG CGCGCGCTGG ACCTCTACGC CGGCATCGAG
CCGGTGCGCG CGGGCGAACC GGCCGTCGGC GGGCTGCAGG CGCTGTCGGG CTTCCTGGAG
GCCAGCGTGC CGGAAGCCGA CCGCGAGCGC ACCTCGGACG TGCTGCTGCG CATCCTCAAC
GGCACGCTGT TCGAGTTGCT GAACCTGACG CGCGAGCGCG CCGGCCTCAA GCCCCTCGTG
CCCGACGAGG CCACCCAGGC CTTCATGACA CAGGCCGTGC TGTCGCTCTC GGATGCCTTC
TTCTACCCGG CGCCGGTGTT GCTGGCGCTG GACGACTACA CCCAGGTGCA GGCCAGCGTG
TTCCAGGTCA CGCGCACGCC GGGCAAGACG CTGGTCTACC TCGGCTGCCT GTTCCTGATC
ATCGGCGTGT TCGCGATGCT CTATGTGCGC GAACGCCGCC TGTGGGTGTG GCTCGAGGAC
GCATCGGACG GCGGCGGCAC GCGCCTGACC GCCGCGCTGT CGTCGACCCG GCAGACGCTC
GACACCGACC GTGAGTTCGA GCAGATACGC GACAGCCTCC TAGCGAAGGA AAGCGCATGA
|
|---|
| Protein sequence | MRFSITLLTV ICIASVIGTV LRQHESMNNY VNQFGPFWAQ VFDALDLYAV YSAWWFLLIL
AFLVASTSLC IARNAPKILV DLKAYKEQIR ASSLKSFHHR AEGTLAAPRA EVLDRVSALL
VAGGWKAKLQ EREGGVMVAA RKGAANKLGY LAAHSAIVLI CIGGLFDGDL VVRAQMALFD
KSAWPGAGLL RNVPAEHVLS EGNPTYRGNI LVGEGQRGGT AVIQLKDGVV LQPLPFDIEL
KKFLVDFYPT GMPKRFASDI VLHDRDTGAT RTATVKVNEP VQHRGVMIYL SSFEDGGSKL
KLRGWPLGGG TPFQMDGEVG TETKIQSERD GQTLGLEFTG LRVINVENLT AVDASGGTDV
RKVDLVNRLE SHLGSGAKTR TEKTLQNVGP SISYKLRDAA GQAREYNNYT LPLTLDGQRV
FLAGVRETPN EPFRYLRIPA DDADGLAGWM RLRGGLNERA LREAAVQRYV ARATPADKPE
LAEQLTVSAR RALDLYAGIE PVRAGEPAVG GLQALSGFLE ASVPEADRER TSDVLLRILN
GTLFELLNLT RERAGLKPLV PDEATQAFMT QAVLSLSDAF FYPAPVLLAL DDYTQVQASV
FQVTRTPGKT LVYLGCLFLI IGVFAMLYVR ERRLWVWLED ASDGGGTRLT AALSSTRQTL
DTDREFEQIR DSLLAKESA
|
|---|
| |