| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A0417 |
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| Symbol | |
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| ID | 4785170 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | - |
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| Start bp | 450094 |
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| End bp | 452490 |
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| Gene Length | 2397 bp |
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| Protein Length | 798 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640088975 |
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| Product | 3-hydroxyacyl-CoA dehydrogenase |
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| Protein accession | YP_001019614 |
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| Protein GI | 124265610 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase
[COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTCGAT TCCAAGTCCG CAAGGTCGCC GTGCTCGGCG CCGGCGTGAT GGGCGCGCAG
ATCGCGGCCC ACCTCGTCAA CGTGAAGGTG CCGGTCGTGC TGTTCGACCT GCCGGCCAAG
GAAGGGCCGA AGAACGGCAT CGTCCTGAAG GCCATCGAGA ACCTGAAGAA GCTCAAGCCG
GCGCCGCTCG GCGTGCCCGA GGACGCCGCG CTGATCGGCG CCGCCAACTA CGAGGAGCAC
CTGGCGCTGC TCGGCGAGTG CGACCTGGTG ATTGAGGCGA TCGCCGAGCG CATGGACTGG
AAGCTCGACC TGTACACGAA GATCGCGCCC CACGTGGCGC CGCGCACGAT CCTGGCGTCC
AACACGTCGG GCCTGTCGAT CACCCGGCTG TCGGCGGCGC TGCCCGAATC CATCAAGCCG
CGCTTCTGCG GGATCCATTT CTTCAACCCG CCGCGCTACA TGGCGCTGGT GGAACTGATC
GACACGCCGA CCACCGACGA TCGCGTGCTC GACGAGCTGG AGAGCTTCGT CACCACCTTC
CTCGGCAAGA GCGTGGTACG CGCGAAGGAC ACGCCGAACT TCATCGCCAA CCGCGTGGGC
ATCGCCGGCA TGCTGGCGAC GATCAAGGAG GCCGAGACCT TCGGCCTCAG CGTCGACGTG
GTGGACGACC TCACCGGCAA GAAGCTCGGC CGCGCCAGCA GCGGCACCTT CCGCACCGCC
GACGTGGTGG GCCTGGACAC CATGGCGCAC GTCATCAAGA CGCTGCAGGA CAACCTGGCC
GATGACCCGT TCTACCCGAG CTACGCGACG CCGCCGGTGC TGTCGGCACT GATCGCCAAG
GGCGCGCTGG GCCAGAAGGT CGGCGCCGGC TTCTACAAGA AGGTCGGCAA GGACATCCTG
CGGCTCGACC CTGCCAAGCA GGATTACGTG CCCGGCGGAG GCAAGGCCGA CGAGATCGTC
GCCCGCATGC TGAAGAAGCC GCCGGCCGAG CGCCTGAAGC TGCTGCGCGA GAGCAGCAAC
CCGCAGGCGC AGTTTCTGTG GGCGATCCTG CGCGACGCCT TCCACTACGC GGCGGTGCAT
CTGGAGGACA TCGCCGACAA CGCGCGCGAC GTCGACTTCG CGATGCGCTG GGGCTTCGGC
ATGCAGCAGG GCCCGTTCGA GCTGTGGCAG GCCGCCGGCT GGCTGCAGGT GGCGGGCTGG
GTCAGGGACG ACATCGACGC CGGCAAGGCG CTGGCGAAGG CGCCGCTGCC GGCCTGGGTG
TTCGACGGCC CGGTCGCCGA GCGCGGCGGC GTGCACACGC CCGAGGGCTC GTGGTCGCCG
TCGCGCCAGG CCTTCGTGCC GCGCAGCGAG CTGCCGGCCT ACCAGCGCCA GCCCTTCCCC
GAGAGCGTGC TGGGCAGCGG TGCGGTCGAT GCGCTGAAGA GCGGCACCGA GCTGTACCGC
AACGACGAGA TCCGCGTCTG GACGCTCGAC GGCGAGGTGC TCATTGCATC GATCACTGCC
AAGCTGCACC TGATCAGCCC GACGGTGACC GAAGGGCTGC TGAAGGCGGT CGAGATCGCC
GAGGAGACGT TCCAGGGCCT GGTGATCTGG TCGCCCGACG ACGTGTTCTC GGCCGGCGCC
AACCTCGAGG CGCTGATGCC GGTGTTCATG AAGAGCGGCG CCAAGGGCAT CGCGCCGGAG
GAAAAGAAGC TGCAGGACGC GATGCTGCGC ATCCGCTACG CCGGCGTGCC GGTGGTCGCC
GCGGTGCGCG GCCTGGCGCT GGGCGGCGGC TGCGAGCTGG CCCTCCACAG CGCGCGGCGC
GTGGCGGCGA TGGAGAGCTA CATCGGCCTG GTGGAAGTGG GCGTGGGCCT GATCCCCGGC
GCCGGCGGGC TGACCTACAT CGCGCGGCGC GCGGCCGAGA TGGCGAACGC CGGCAATGCC
AACGCCGACC TCCTGAAGTT CGTGACCGAC GGCTTCACCA GCGCTGCGAT GGCCAAGGTG
GGCACCAGCG CGATCGAGAG CCGCAAGCTC GGCTACCTGG TCGACGGCGA CGTCATCGTG
CCGCACAAGG ACGAGCTGCT CTACGTGGCG ACCCAGCAAG CCAAGGCGCT GTTCGCGTCG
GGCTACCGCG CGCCGGTGAA GCGGCTGTTC CCGGTGGCCG GCCGCAGCGG CATCGCCACC
ATCAAGGGCC AGCTCGCCAA CATGCGCGAC GGCGGCTTCA TCAGCTCCCA CGACTTCCAC
ATCAGCGCGC TGATCGCCGA CGTGGTGTGC GGCGGCGAGG TCGACGCCGG ATCGCTGGTC
ACCGAGGAGT ACCTGATGGC GCTGGAGCGC AGGCACTTCT GCTCGCTGCT GGAGCACCCC
AAGTCCCAGG AACGGATCAT GGGCATGCTG CAGACCGGCA AGCCGGTCCG GAACTGA
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| Protein sequence | MSRFQVRKVA VLGAGVMGAQ IAAHLVNVKV PVVLFDLPAK EGPKNGIVLK AIENLKKLKP
APLGVPEDAA LIGAANYEEH LALLGECDLV IEAIAERMDW KLDLYTKIAP HVAPRTILAS
NTSGLSITRL SAALPESIKP RFCGIHFFNP PRYMALVELI DTPTTDDRVL DELESFVTTF
LGKSVVRAKD TPNFIANRVG IAGMLATIKE AETFGLSVDV VDDLTGKKLG RASSGTFRTA
DVVGLDTMAH VIKTLQDNLA DDPFYPSYAT PPVLSALIAK GALGQKVGAG FYKKVGKDIL
RLDPAKQDYV PGGGKADEIV ARMLKKPPAE RLKLLRESSN PQAQFLWAIL RDAFHYAAVH
LEDIADNARD VDFAMRWGFG MQQGPFELWQ AAGWLQVAGW VRDDIDAGKA LAKAPLPAWV
FDGPVAERGG VHTPEGSWSP SRQAFVPRSE LPAYQRQPFP ESVLGSGAVD ALKSGTELYR
NDEIRVWTLD GEVLIASITA KLHLISPTVT EGLLKAVEIA EETFQGLVIW SPDDVFSAGA
NLEALMPVFM KSGAKGIAPE EKKLQDAMLR IRYAGVPVVA AVRGLALGGG CELALHSARR
VAAMESYIGL VEVGVGLIPG AGGLTYIARR AAEMANAGNA NADLLKFVTD GFTSAAMAKV
GTSAIESRKL GYLVDGDVIV PHKDELLYVA TQQAKALFAS GYRAPVKRLF PVAGRSGIAT
IKGQLANMRD GGFISSHDFH ISALIADVVC GGEVDAGSLV TEEYLMALER RHFCSLLEHP
KSQERIMGML QTGKPVRN
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