Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpe_A0411 |
Symbol | |
ID | 4785164 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylibium petroleiphilum PM1 |
Kingdom | Bacteria |
Replicon accession | NC_008825 |
Strand | + |
Start bp | 444745 |
End bp | 445554 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640088969 |
Product | putative transmembrane protein |
Protein accession | YP_001019608 |
Protein GI | 124265604 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0668] Small-conductance mechanosensitive channel |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.306072 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGACATCG ACGCATTGCA GACCTTCCTC GGCACCACCG TGACTGCGGT GATCCTCAAG ATCCTGGCCG CGCTCGCGTT CTGGCTCGTC GGCCGCTGGC TGATCGGCCG GGTGATCGCG CTGGTGCAGG CGGCCATGAG CCGCAACCAC GTCGACCCCA CCCTGACCAA GTACCTGGGC TCGATCATCG CCGTCGCGCT GAACATCGCG CTGGTGCTCG GCATCCTGGG CTACTTCGGG ATCGAGACCA CCTCCTTTGC GGCGATGCTG GCCGGCGCCG GCGTGGCGAT CGGTGCGGCG TGGAGCGGGC TGCTCGGCAA CTTCGCGGCC GGCGCCTTCA TGCTGATCCT GCGGCCCTTC AAGGTGGGCG ACTTCGTCAG CGTGGGCGGC GTGGTGGGTA CGGTGCGAGA GCTCGGCCTG TTCGGGACCA CGATCGTCAC GCCCGACAAC GTGATGACGA TCGTGGGCAA CGGCAAGATC TTCGGCGACA CGATCCAGAA CTTCTCCGTG CTGCCGGTGC GGCGCGTCGA GCGGGTGGCG CAGCTGGCCC ACGGCGTGGA TCCGCTCGAT GCGATCGCGC GCCTGAAGGC CGCGGTGGCG CAGATCCCGA ACATCTCCAA GGACATGCCG CCCGAGGTCA ACCTGCTCGA CTTCAAGCTC GAAGGACCGC AGATCGCGGT GCGCCCCTAC GCCCACACCG ACCACTACTG GCAGGTCTAC TTCGACACCA ACGAGGCGAT CGTGCGGGTG TGCCAGGAGG CCGGCTGGCC GGTCCCGTCG GCGCTGCACC AGATCGTGAA GCCGGCGTGA
|
Protein sequence | MDIDALQTFL GTTVTAVILK ILAALAFWLV GRWLIGRVIA LVQAAMSRNH VDPTLTKYLG SIIAVALNIA LVLGILGYFG IETTSFAAML AGAGVAIGAA WSGLLGNFAA GAFMLILRPF KVGDFVSVGG VVGTVRELGL FGTTIVTPDN VMTIVGNGKI FGDTIQNFSV LPVRRVERVA QLAHGVDPLD AIARLKAAVA QIPNISKDMP PEVNLLDFKL EGPQIAVRPY AHTDHYWQVY FDTNEAIVRV CQEAGWPVPS ALHQIVKPA
|
| |