| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A0395 |
|---|
| Symbol | prpE |
|---|
| ID | 4785911 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylibium petroleiphilum PM1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008825 |
|---|
| Strand | + |
|---|
| Start bp | 427626 |
|---|
| End bp | 429521 |
|---|
| Gene Length | 1896 bp |
|---|
| Protein Length | 631 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640088950 |
|---|
| Product | propionyl-CoA synthetase |
|---|
| Protein accession | YP_001019592 |
|---|
| Protein GI | 124265588 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases |
|---|
| TIGRFAM ID | [TIGR02316] propionate--CoA ligase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGACT ACGCCACCTT CTACCGCCGC TCGATCGAAG ACCCGAAGGG TTTCTGGGCC
GAGCAGGCCG AGCTGATCGA CTGGCACCGC CCGTTCGACG AAGTGCTCGA CGACAGCCGG
CCGCCCTTCA CCCGCTGGTT CGTCGGCGGC CAGACCAACC TCTGCCACAA CGCCGTCGAC
CGCCACGCCG CCCGGCGCCC CGACGACAAC GCCCTCATCT GGGTCTCCAC CGAAGTCGGT
CAGGAACGCA CCTACAGCTA CGCCCAACTC CAGCGCGAAG TCGAACGCAT GGCCGCCGGC
CTCGTCGAAC TCGGCGTCGG CCAGGGCGAC CGCGTCCTCA TCTACATGCC CATGATCCCC
GAGGCCGCCT TCGCCATGCT CGCCTGCGTG CGCATCGGCG CCATCCACTC CGTCGTCTTC
GGCGGCTTCG CCAGCGTCAG CCTCGCCAGC CGCATCGACG ACGCCCAACC CAAACTCATC
GTCAGCGCCG ACGCCGGCAG CCGCGCCGGC AAAGTCGTCC CCTACAAACC CCTCCTCGAC
GAAGCCATCC GCCTGGCCAA GAACAAACCC CGGCACGTCC TCATGGTCGA CCGCGGCCTC
GCCCCCAGCC AACCCGTCGA AGGCCGCGAC ATCGACTACG CCACCCTCAG GGCGCGCCAC
CTCGACAGCC GCGTCCCCTG CACCTGGGTC GACGCCACCC ACCCCAGCTA CACCCTCTAC
ACCAGCGGCA CCACCGGCAC CCCCAAGGGC GTACAGCGCG ACACCGGCGG CTACGCCGTC
GCGCTGGCCG CCAGCATGAA ACACATCTAC CTCGGCAACG CCGGCGAAAC CTACTTCTCC
ACCAGCGACA TCGGCTGGGT CGTCGGCCAC AGCTACATCG TCTACGGCCC GCTCCTCGCC
GGCATGGCCA CCATCATGTA CGAAGGCCTG CCCATCCGCC CCGACGCCGC CATCTGGTGG
AGCCTGGTCG AGAAATACAA AGTCACCGCC ATGTTCAGCG CCCCCACCGC CGTGCGCGTG
CTCAAGAAAC AAGACCCCGC GGCCCTCAAG AAACACGACC TCAGCAGCCT GCGCGCCCTG
TTCCTGGCCG GAGAGCCGCT CGACGAACCC ACCGCCCAGT GGATCGCCGA CGCCCTGGGC
GTGCCCATCG TCGACAACTA CTGGCAGACC GAATCCGGCT GGCCCATCCT CAGCATCGCC
AACGGCGTGC AGCGCCAGCC CAGCAAGTTC GGCAGCCCCG GCATCCCCAC CTACGGCTAC
AAGGTCAAGC TCGTCGACGA CGCCAGCGGC GAAGAACTGC ACGGCGCCCA CCAGAAAGGC
GTGCTCGTGG TCGAAGGCCC GCTGCCGCCC GGCTTCATGC AGACCGTCTG GCGCGACGAC
GACCGCTTCG TCAACACCTA CTGGAAAAGC GTGCCCGGCC AGAGCGTCTA CAGCAGCTTC
GACTGGGGCA TCCGGGACGA AGACGGCTAC TACTACATCC TCGGGCGCAC CGACGACGTC
ATCAACGTCG CCGGGCACCG GCTGGGCACC CGCGAGATCG AGGAAAGCGT CTCCAGCCAC
GCCAACGTGG CCGAAGTGGC GGTGGTCGGG GTGGCCGATC AGCTCAAGGG CCAGGTGGCC
GTGGCCTTCG TGGTGCCCAA GGACGCGCGG GGGCTGGAGG AGCCGCAGGC GCGGCTGAAG
CTCGAGGGCG ACATCATGAA GACGGTGGAC CAGCAGCTCG GGGCGGTGGC GAGGCCGGCG
CGGGTGCACT TCGTGACGCT GCTGCCCAAG ACCCGCTCGG GCAAGCTGCT GCGCCGTGCG
CTGCAGGCGG TGGCCGAGGG CCGCGACCCG GGCGACCTGA CCACCATCGA GGACCCCACG
GCCTTGCAGG CGATCCGGGA GTTGCTCGGG CGGTGA
|
|---|
| Protein sequence | MTDYATFYRR SIEDPKGFWA EQAELIDWHR PFDEVLDDSR PPFTRWFVGG QTNLCHNAVD
RHAARRPDDN ALIWVSTEVG QERTYSYAQL QREVERMAAG LVELGVGQGD RVLIYMPMIP
EAAFAMLACV RIGAIHSVVF GGFASVSLAS RIDDAQPKLI VSADAGSRAG KVVPYKPLLD
EAIRLAKNKP RHVLMVDRGL APSQPVEGRD IDYATLRARH LDSRVPCTWV DATHPSYTLY
TSGTTGTPKG VQRDTGGYAV ALAASMKHIY LGNAGETYFS TSDIGWVVGH SYIVYGPLLA
GMATIMYEGL PIRPDAAIWW SLVEKYKVTA MFSAPTAVRV LKKQDPAALK KHDLSSLRAL
FLAGEPLDEP TAQWIADALG VPIVDNYWQT ESGWPILSIA NGVQRQPSKF GSPGIPTYGY
KVKLVDDASG EELHGAHQKG VLVVEGPLPP GFMQTVWRDD DRFVNTYWKS VPGQSVYSSF
DWGIRDEDGY YYILGRTDDV INVAGHRLGT REIEESVSSH ANVAEVAVVG VADQLKGQVA
VAFVVPKDAR GLEEPQARLK LEGDIMKTVD QQLGAVARPA RVHFVTLLPK TRSGKLLRRA
LQAVAEGRDP GDLTTIEDPT ALQAIRELLG R
|
|---|
| |