| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A0365 |
|---|
| Symbol | |
|---|
| ID | 4786856 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylibium petroleiphilum PM1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008825 |
|---|
| Strand | + |
|---|
| Start bp | 401863 |
|---|
| End bp | 403893 |
|---|
| Gene Length | 2031 bp |
|---|
| Protein Length | 676 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640088920 |
|---|
| Product | transcriptional regulator AcoR |
|---|
| Protein accession | YP_001019562 |
|---|
| Protein GI | 124265558 |
|---|
| COG category | [K] Transcription
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG3284] Transcriptional activator of acetoin/glycerol metabolism |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGATCCTGT CCCACCAACA CGTCGACGAG ATCCGCCGCA TCGCCGCGGG TCACGCCCCC
GCGGCCGGCA CGCCCGACAG CCTGATCCAC CGCTCCTGGC ACCGCTGCGT CAACACGCAC
GGCCTCGATC CCGCGCAGTC CTTCGGCCCG CGCGTCGAGA GCCCGACACG GCTGCGCGAA
TCGCGCGAGC GCATCGAGGA GTACCTGCAG GTCGCGCGCG GCGGCATGGA GCAGCTCTTC
AAGCGCGTGT CCGACCTCGG CTACGTGCTG CTGCTGACCG ACGCCGACGG CGTGACGGTC
GACTACATCG GCAACGACTC CTGGGGCAAG GACGCGCAGC GCGCCGGCCT CTACCTCGGC
GCCAACTGGA AGGAAGAGAT CGCCGGCACC AACGGCATCG GCACCTGCAT CTACGAACAG
GCCGCGCTCA CCTGCCACCG CGACGACCAC TTCTACACCG GCAACGTCGG CCTGAGCTGC
AACACCGCGC CGCTGTTCCA TCCCGACGGC AAGCTGATGG GCGTGCTCGA CGTGTCGGCG
CTGGCCATGC CCAACGCGCG CGAGAGCCAG CACCTCGCGC TGCACCTCAC CACGCTGTAC
GGGCAGATGA TCGAGGACGC CAACTTCGTG CGTCACTTCC GCGATCACTG GATCCTGCGG
CTGGCCACCA GCTGGGCGCT GGTCGACGTG CTGGGCGACA TGATGCTGGC CTTCGACAGC
GACGGCGTGC TGGCCGGCGC CAGCACCGGC GCCCGCAAGT GGCTGTCCGG CCTGGCGCTG
CAGGGCGGCG ACGACGCCCC CATCGAGGGC CGCCACCTGA CCGACGTGTT CCGCTGCTCG
ATGGACGACA TCTGGCGCCT CGCGCGCTCG TCCAACGTGA TGGACCGCGC GCTGCTGTCG
GCGTTCGACC ACCAGAGCTA CTTCGGCAGC GTGGTCGCGC CGCGCATGCG CAGCGCGGCC
AGCAGCGCCG CGGGCCCGCG CGACGTGACC GACGCGGCGC CCGCGCTCGC GCCGGCCAGC
CCGGCGCTCG AACGCCTGGC CGGCGACGAC AAGCAGATGC GCGCGCTGCA GGACCAGGCG
CGCCGCCTGG CCAACAAGCG CATCAACATC CTGATCCAGG GCGAGACCGG CACCGGCAAG
GAAGTGTTCG CGAAGGCGCT GCACGAGTCG AGCACGCGCC ACGACAAGCC CTTCGTCGCC
GTCAACTGTG CGTCGATCCC CGAGTCGCTG ATCGAGAGCG AGCTGTTCGG CTACACCGCC
GGCACCTTCA CCGGCGCGCG CAGCCGCGGC ATGAAGGGCC TGATCGTGCA GGCCCACGGC
GGCACGCTGT TCCTCGACGA GATCGGCGAC ATGCCGCTGC ATCTGCAGAC GCGCCTGCTG
CGCGTGCTGT CCGAGCACGA GGTGCTGCCG CTCGGCGCCG ACCGGCCCAT CCGCGTGGAG
CTCACCGTCA TCGCCGCCTC GCACCGCGAC CTGCGCCAGC TCATCGCCGC CGGCAGCTTC
CGCGAGGACC TGTACTACCG CCTGTGCGGC GCCACACTGC CGCTGCCGGC GCTGCGCGAC
CGCCGCGATC TCGGCTACCT GATCGAGCTG ATCCTGCGCG AGGAAGCCGA GCACCTGGAC
ACCCGCGCCT ACATCGCCGA CGAGGCGCTG GAGCTGCTGG AGCGCTACGA ATGGCCGGGC
AACGTGCGGC AGCTGCGCAA CGTGCTGCGC TTCGGCCTCG CGCTGTCGGA CGGCGAGGGC
ATCTATCCCG AGCACCTGCC GCCCGAGGTG ACCGCGCCCC CGGTGCTGCT GTTGCTGCCG
CCGGCCTCGG GCGCGGTGCC GGCGGTGTCC GTGGCGCAGT CGCCTCCGGC GCGCGCGATG
ACGCGTCCGC CGGAGGCCGA GCGCCTGCTC GCTGCGCTGC AGGAGCACCG CTGGAACATC
ACCGCGGTGG CCGCGCAGGC CGGGCAGAAC CGCACCACCA TCTACCGGCA GATGAAGCGC
TTCGGCATCG TCTCGCCCAC GCAGCTGCCG CCCGAGGGCG AACGCTCCTA G
|
|---|
| Protein sequence | MILSHQHVDE IRRIAAGHAP AAGTPDSLIH RSWHRCVNTH GLDPAQSFGP RVESPTRLRE
SRERIEEYLQ VARGGMEQLF KRVSDLGYVL LLTDADGVTV DYIGNDSWGK DAQRAGLYLG
ANWKEEIAGT NGIGTCIYEQ AALTCHRDDH FYTGNVGLSC NTAPLFHPDG KLMGVLDVSA
LAMPNARESQ HLALHLTTLY GQMIEDANFV RHFRDHWILR LATSWALVDV LGDMMLAFDS
DGVLAGASTG ARKWLSGLAL QGGDDAPIEG RHLTDVFRCS MDDIWRLARS SNVMDRALLS
AFDHQSYFGS VVAPRMRSAA SSAAGPRDVT DAAPALAPAS PALERLAGDD KQMRALQDQA
RRLANKRINI LIQGETGTGK EVFAKALHES STRHDKPFVA VNCASIPESL IESELFGYTA
GTFTGARSRG MKGLIVQAHG GTLFLDEIGD MPLHLQTRLL RVLSEHEVLP LGADRPIRVE
LTVIAASHRD LRQLIAAGSF REDLYYRLCG ATLPLPALRD RRDLGYLIEL ILREEAEHLD
TRAYIADEAL ELLERYEWPG NVRQLRNVLR FGLALSDGEG IYPEHLPPEV TAPPVLLLLP
PASGAVPAVS VAQSPPARAM TRPPEAERLL AALQEHRWNI TAVAAQAGQN RTTIYRQMKR
FGIVSPTQLP PEGERS
|
|---|
| |