| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A0350 |
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| Symbol | |
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| ID | 4786841 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | - |
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| Start bp | 384725 |
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| End bp | 386344 |
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| Gene Length | 1620 bp |
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| Protein Length | 539 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640088905 |
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| Product | GMC family oxidoreductase |
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| Protein accession | YP_001019547 |
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| Protein GI | 124265543 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCATCA TCGACCCGTT CAAGGACGGA CTCGGCCGCG GCTGGAAGGT GTTCGGCGGA
CGCCACGCGG GCGCGCAGCC GCTGCCGGAG CGGATCAGCT GCGACGTGGC GATCGTCGGG
AGCGGCGCGG GCGCCGGCAT CACGGCCGAA CTGCTGACCC AGGCCGGCCT CGACGTGCTG
CTGATCGAGG AAGGCCCGCT GAAGACCAGC AGTGACTTCC ACCAGCTCGA GCGCGAGGCC
TATCCGCAGC TCTACCAGGA GAGCGCCGGG CGCAAGACGG CCGACAAGGC GATCAACATC
CTGCAGGGCC GCTGCGTCGG CGGATCGACC ACGGTCAACT GGACCAGTTC CTTCCGCACG
CCCGACGACA CGCTGGCCTA CTGGCAGCAG CACTTCGGCC TGAAGGACTG CACGCTCGAG
GCACTGGCGC CGTGGTTCGC GCAGGCCGAG CGGCGTCTCG GCATCGGCCC CTGGCTGGCG
CCGCCGAACG AGAACAACGA ACTGCTCAAG CGCGGCGCCG ACCGGCTGGG CATCCGCGCC
GCGACGATCC AGCGCAACGT GAAGGGCTGC TGGAACCTCG GCTCCTGCGG CCTGGGCTGC
CCGACGAACG CGAAGCAGTC GATGCTGGTG ACCACGATCC CCGCCGCGCT GGAGCGCGGC
GCGCGGCTGC TCGTGGAAAC GCGCGCGCAG GCCTTCGAGC ACGACGGTTC GAAGGTCCGC
TGGCTCGACT GCGTGCCGGT CGCGACCGAC GGCAGCGCCG CGTCGGACCG CACGGTGCGC
GTGAGCGCGA AGCACTACGT GGTGGCGGGC GGTGCGATCA ACTCGCCCGG GCTGCTGCTG
CGATCGAAGG CGCCCGATCC GCACAACCGC CTCGGGCACC GCAGCTTCCT GCATCCGGTG
GTGGCGTCGG CGGCTGTCTT TGATCAGCGG GTCGAGGGCT GGGCCGGCGC GCCACAGACG
ATCTACAGCG ACCACTTCCT CGGCGTCGAT CCGATCGACG GCCCCATCGG CTACAAGCTC
GAGGCCCCAC CGATCCACCC GACGGTGTTC GCGACGACGA TGGCCGGCTT CGGGCTCGAG
CAGACGCGGC AGCTCAAGCA GTTCCCGCAC ACGCATGCGC TGCTCGCGCT GCTGCGCGAC
GGCTTCCATC CGCAGTCGCC CGGCGGGCGC GTGCGGCTGC GCGACGATCG CACGCCGCTG
CTCGACTACC CACTGACCGC GTTCGTGATG GACGGCGCGC GCCGCGCGCT GCTGAGCATG
GCCGAGCTGC AGTTCGCAGC CGGTGCGCGC GAGGTGATCC CGACCCACGA GCTGGCGCGC
AGCTACCGCA GCTGGGACGA GGCGAAGCGC GAGATCGCCG CCCTGCCGAT GAAGCCGCAG
CTCACGCGCG TGTTCAGCGC GCATGCCATG GGCGGCTGCG GCTTCGCCGG CGAGGCGAAG
CTGGGCGTGG TGCAGCCGAA CGGTCAGCAC TGGCAGCTCG AGAACCTGTC GGTGCACGAC
GGCTCGCTGT TCCCCACCAG CGTGGGCGCG AACCCGCAGC TGTCGATCTA CGGCATCGTC
AACCGGCTCG CCAGCGGACT GACGCATCGC CTGACGGGCC GTACGGTTTC GCTGGCCTAG
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| Protein sequence | MAIIDPFKDG LGRGWKVFGG RHAGAQPLPE RISCDVAIVG SGAGAGITAE LLTQAGLDVL
LIEEGPLKTS SDFHQLEREA YPQLYQESAG RKTADKAINI LQGRCVGGST TVNWTSSFRT
PDDTLAYWQQ HFGLKDCTLE ALAPWFAQAE RRLGIGPWLA PPNENNELLK RGADRLGIRA
ATIQRNVKGC WNLGSCGLGC PTNAKQSMLV TTIPAALERG ARLLVETRAQ AFEHDGSKVR
WLDCVPVATD GSAASDRTVR VSAKHYVVAG GAINSPGLLL RSKAPDPHNR LGHRSFLHPV
VASAAVFDQR VEGWAGAPQT IYSDHFLGVD PIDGPIGYKL EAPPIHPTVF ATTMAGFGLE
QTRQLKQFPH THALLALLRD GFHPQSPGGR VRLRDDRTPL LDYPLTAFVM DGARRALLSM
AELQFAAGAR EVIPTHELAR SYRSWDEAKR EIAALPMKPQ LTRVFSAHAM GGCGFAGEAK
LGVVQPNGQH WQLENLSVHD GSLFPTSVGA NPQLSIYGIV NRLASGLTHR LTGRTVSLA
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