| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A0300 |
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| Symbol | |
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| ID | 4786909 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | - |
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| Start bp | 325179 |
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| End bp | 326723 |
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| Gene Length | 1545 bp |
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| Protein Length | 514 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640088852 |
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| Product | D-alanyl-D-alanine carboxypeptidase |
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| Protein accession | YP_001019497 |
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| Protein GI | 124265493 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2027] D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) |
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| TIGRFAM ID | [TIGR00666] D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.807373 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0473722 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCGAA GCCCGAATCT CCTGTGGCGC TGCGTCGTGG GGGTGTCGGC CCTGGTCGGC
GGCACGGCGA TGGCAGCGCC GAACGCCCTG CCCCCGGACG ACCTGCCGGC CGCCGTGCAG
ACCGCGCTGA AGCGAGCGCA GTTGCCCGCC GATGCGCTGG TCGCGTACAT CATCGAGCTC
GGGCCGCCAG GCCCGCCCCG CGGGCTGCCG CGACTGACGC ACCGCGCCCA ACAGCCGGTC
AACCCGGCCT CGCTGATGAA GCTTTACACG ACCGGCGTGG CGCTGGAGCT GCTGGGGCCG
GCGTGGACCT GGCCCACGCC GGTGCTGACC ACCGGACAGG TGGTGGACGG CGTGCTGCAG
GGCGACCTGA TCCTCCAGGG CCGCGGGGAC CCGACGCTGG TGATCGAACG GCTGTGGCTG
CTGCTGCGCG AAGTGCGGCA ACGCGGCATC CACGAGATCC GCGGCGACAT CGTGCTCGAC
GGAAGTGCCT TCATGTTGAA CGGCGCCGAC GCCGGCGATC CGGCCGACTT CGACGGCGAA
CGTTTCCGGC CCTACAACGT GCGGCCCGAT GCGCTGCTGC TGAACCACAA GTCGGTCACG
CTGCGCTTCG TTCCCGAGCC GTCGCGCGGC GTGGCCCGCG TCAGCACCGA CGTCAACCTG
GCCGGCGTGC AGATCGACAG CGCGGTGCCC ATGGTGTCCG GCCCCTGCGG CGACTGGCGC
GGCAGCCTGA AGCCGGCCTT CGACGACCCG GGACGCATCC GGTTGACCGG CCTCTACCCT
GTGAGCTGCG GCGAGAAGAC CTGGCCTGTC GCCTACGCCG AGCCGGGCAG CTACAACGTG
CGGCTGATCG CCGAAGCCTG GCATGAGGTC GGCGGGCAGC TGGCCGGCAG CGTGCGCAAC
GGCCCCGCGC CCGTCGCGGC ACAGCCGCTG TTCGAGGCCA CGTCACCGCC GCTGGCGGCG
GTGGTGCGAG ACATCAACAA GTTCAGCAAC AACGTGATGG CGCAGCAGCT GTTCCTGAGC
CTCGGACTGA TCCCCGCCGG CACGCTGCCG CTGCCGGCTT CGGCGACCAC GGTCGCGACG
GGGGAGGTGT CGACGCCACA AACGCCCGCA GGCAACACGG CCGATGCCGC GCGCGAGATG
GTGCGCGCTC AGGTGCGCAG CCGTGCCGGC TGCACAGACG GCGAGTTCTC GATCGACAAC
GGCTCGGGCC TGTCGCGCCA GTCCCGCAGC AGCGCCCGTT GCCTGGGCGC CTGGCTGCAG
GCGCTGTGGG CCAGCCCGGT GATGCCCGAG CTGATGAGTT CGCTGCCGCT GACCGGGATC
GACGGCACGG CGCGCCGGCC GGGCCGCAAC TGGGGCGCCG CGCTCGGCCG CGCCCACCTG
AAGACCGGTT CGCTGCGCGA TGCGATGGGC CTGGCCGGCT ACGTGCTCGG GCAGTCGGGG
CGGCGCTACG CCTTCGTCGC CATCGTCAAC CATCCCAGCG CCGGCGCGGC GCGGCCGGTG
CTCGACGCGC TGGTGCAATG GGCGGCCGAG GACAACGGGC GCTGA
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| Protein sequence | MIRSPNLLWR CVVGVSALVG GTAMAAPNAL PPDDLPAAVQ TALKRAQLPA DALVAYIIEL
GPPGPPRGLP RLTHRAQQPV NPASLMKLYT TGVALELLGP AWTWPTPVLT TGQVVDGVLQ
GDLILQGRGD PTLVIERLWL LLREVRQRGI HEIRGDIVLD GSAFMLNGAD AGDPADFDGE
RFRPYNVRPD ALLLNHKSVT LRFVPEPSRG VARVSTDVNL AGVQIDSAVP MVSGPCGDWR
GSLKPAFDDP GRIRLTGLYP VSCGEKTWPV AYAEPGSYNV RLIAEAWHEV GGQLAGSVRN
GPAPVAAQPL FEATSPPLAA VVRDINKFSN NVMAQQLFLS LGLIPAGTLP LPASATTVAT
GEVSTPQTPA GNTADAAREM VRAQVRSRAG CTDGEFSIDN GSGLSRQSRS SARCLGAWLQ
ALWASPVMPE LMSSLPLTGI DGTARRPGRN WGAALGRAHL KTGSLRDAMG LAGYVLGQSG
RRYAFVAIVN HPSAGAARPV LDALVQWAAE DNGR
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