| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A0278 |
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| Symbol | secF |
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| ID | 4786947 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | + |
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| Start bp | 302387 |
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| End bp | 303421 |
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| Gene Length | 1035 bp |
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| Protein Length | 344 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640088830 |
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| Product | preprotein translocase subunit SecF |
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| Protein accession | YP_001019475 |
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| Protein GI | 124265471 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0341] Preprotein translocase subunit SecF |
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| TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR00966] protein-export membrane protein SecF |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.182784 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.130689 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGTTCT TCCGCATCAA GCGCGACATC CCGTTCATGA AGCACGCGTT GATCTTCAAC
GTCGTGTCCT TCGTGACCTT TGCCGCCGCC GTGTTCTTCC TCGTGACGCG CGGTCTGCAC
CTGTCGATCG AGTTCACCGG CGGCACGGTG CTCGAGGTCG AGTACGCCAA GACGGCCGAC
GTGCCCAAGG TGCGCAGTGC GGTCGAGGCG CTCGGTTTCG GTGAGGTGCA GGTGCAGAAC
TTCGGCACCT CGCGCGACGT ACTGGTCCGG CTGCCGTTGC GGGGCGACGT CAAGCAGCAG
GAGGTGGTGG GCCGTGTGTT CAGCGCGCTG TGCGCGGCCG AGGGCGGTCA GGTCACGCAG
TCGCAATCGG TCAGCGACAA GGGCGAGTCG GTCAGCGCGC AGGTCTGCGA CGCCGGCGGC
GCGCAACCGG TGATGCTCAA GCGCAGCGAG TTCGTCGGGC CGCAGGTCGG CAAGGAACTG
GCGACCGACG GTGCGATGGC GCTGGGCTTT GTCGTCATCG GCATCATGAT CTATCTTGCG
ATCCGCTTCG AATGGAAGTT CGCGGTCGCG GCGATCGTCG CCAACCTGCA TGACGTGATC
ATCATCCTGG GCTTCTTCGC CTTCTTCCAG TGGGAATTCT CTCTGTCGGT GCTGGCGGCC
GTGCTGGCGG TGCTGGGCTA TTCGGTCAAC GAGTCGGTGG TCATCTTCGA CCGGATTCGC
GAGGCCTTCC GCCGCTATCG CAAGATGAAC ACGCACCAGG TGATCGACCA TGCGATCACC
TCGACCATGA GCCGCACCAT CATCACGCAC GGGTCGACGC AGATGATGGT GTTGTCGATG
CTGGTGTTCG GCGGTGCGAC GCTGCACTAC TTCGCAGTCG CACTGACGAT CGGCATCTTG
TTCGGCATCT ACTCTTCGGT GTTCGTCGCC GCGGCCATTG CGATGTGGCT GGGCGTCAAG
CGGGAGGATC TGATGAAGGC GGGCAGCGTC AAGGGCGGCG ATCCCGACGA CCCGAATGCC
GGGGCCGTGG TGTAG
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| Protein sequence | MEFFRIKRDI PFMKHALIFN VVSFVTFAAA VFFLVTRGLH LSIEFTGGTV LEVEYAKTAD
VPKVRSAVEA LGFGEVQVQN FGTSRDVLVR LPLRGDVKQQ EVVGRVFSAL CAAEGGQVTQ
SQSVSDKGES VSAQVCDAGG AQPVMLKRSE FVGPQVGKEL ATDGAMALGF VVIGIMIYLA
IRFEWKFAVA AIVANLHDVI IILGFFAFFQ WEFSLSVLAA VLAVLGYSVN ESVVIFDRIR
EAFRRYRKMN THQVIDHAIT STMSRTIITH GSTQMMVLSM LVFGGATLHY FAVALTIGIL
FGIYSSVFVA AAIAMWLGVK REDLMKAGSV KGGDPDDPNA GAVV
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