| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A0265 |
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| Symbol | |
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| ID | 4786934 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | + |
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| Start bp | 286976 |
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| End bp | 289615 |
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| Gene Length | 2640 bp |
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| Protein Length | 879 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640088817 |
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| Product | DNA topoisomerase III |
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| Protein accession | YP_001019462 |
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| Protein GI | 124265458 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0550] Topoisomerase IA |
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| TIGRFAM ID | [TIGR01056] DNA topoisomerase III, bacteria and conjugative plasmid |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.948213 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0296543 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGCGTGCG GGACGGCGCT GCGATCGGGC GACAACGACA TCGAGAACAT GAGCAAAGCA
CTGGTCATCG CCGAGAAACC TTCCGTCGCA CAAGACATCG TGCGGGCCCT GACGCCCACG
AGCGGCAAGT TCGAGAAGCA CGACGATCAC TTCGAGAACG AGCACTACGT CGTCACCTCG
GCGGTCGGCC ACCTGGTCGA GATCAAGGCG CCCGAGGAGT ACGACGTGAA GCGCGGCAAG
TGGAGCTTCG CCCACCTGCC GGTGATCCCG CCGCACTTCG ATCTCGCACC GATCGACAAG
GCCAAGAGCC GGCTCAACGC GGTGGTCAAG CAGGTCAAGC GCAAGGACGT CGGCGAGCTC
ATCAATGCCT GTGACGCGGG ACGCGAGGGC GAGCTGATCT TCCGCCTCAT CGTGCAGTAC
GCCGGCACCG AGAAGAAGCC GATCGACAAG CCGGTGCGCC GCCTGTGGCT TCAGAGCATG
ACGCCGCAGG CGATCCGCGA CGGCTTCGAG CGCCTGCGCT CCGACGCCGA TCTGCGCGGC
CTGGCCGACG CCGCCCGCAG CCGCAGCGAG GCCGACTGGC TGGTCGGCAT CAACGGTACG
CGAGCGATGA CGGCCTTCAA CTCGCGCGAC GGCGGTTTCT TCCTCACCAC CGTCGGCCGG
GTGCAGACGC CCACGCTCAG CATCGTGGTC GAGCGCGAGG AGAAGATCCG CAAGCACGTG
GCGCGCGACT ACTGGGAGCT CAAGGCCACG TTCGCCGCCC AGGCCGGCGA GTACGAGGGC
AAGTGGTTCG ACCCGGCATG GAAGAAGAAC GACGATGCCG AGCGCCGCGC CGACCGGCTC
TGGAACGAGG CCGATGCGCA GGCCATCGCG CAGGCGGTGC GCGGCCAGCC GGCCACCGTG
ACCGAGGAAT CCAAGCCCAG CACACAGAGC AGCCCTCAGC TCTATGACCT GACGCTGCTG
CAGCGCGAGG CCAACTCGCG CTTCGGCTTC TCGGCCAAGA CCACGCTCAG CATCGCGCAG
GCGCTGTACG AGAAGCACAA GGTGCTGACC TACCCGCGGA CCGACAGCAA GGCGCTGCCG
GAAGACTACG TCGGCGTCGT GAAGCAGACG ATGGAGATGC TCGCCGCCGA GGATCTGCCC
GGGCCGCTGA AGGCTCTGTC GGCGCACGCC CGCAAGGCGG TGAAGGAGGG CTACGTCAAG
CCCAACAAGC GCATCTTCGA CAACGCCAAG GTCTCGGACC ACTTCGCGAT CATTCCGACC
TTGCAGGCGC CCAAGAGCCT GACCGAGGTG GAGGCCAAGC TCTACGACCT GGTGGTCAAG
CGCTTCCTCG CGGTGTTCTA CCCGCCGGCC GAGTTCCTGG TCACGACGCG CATCTCCACC
GTCAAGGCGG GCAGCGCTGA ACATCGGTTC CAGACCCACG GCAAGGTGAT GGTCAAGCCG
GGCTGGCTGG CCGTCTATGG CCGCGACGTG GAAGATGCGG ATGCCACGCT GGTGCCGGTC
GAGCCCGGCG AAGTGGTGCG CACCGAGAGC GTTGACGTCA ACGCGCTCAA GACCAAGCCG
CCGGCACGCT ACACCGAGGC CACGCTACTG TCGGCGATGG AAAGCGCCGG CAAGCTGATC
GATGACGACG AACTGCGCGA GGCGATGCAG GAGAAGGGGC TGGGCACGCC GGCCACCCGC
GCGCAGACCA TCGAAGGCCT GATCCTCGAG AAGTACATGC ACCGCGACGG CCGCGAGCTG
ATCCCCACCG CCAAGGCCTT CCAGCTGATG ACGCTGCTGC GCGGCCTGCA GGTCGAGGAG
CTGACCCAGC CCGAGCTGAC CGGCAACTGG GAGTACCAGC TCGCCGAGAT GGAGAAGGGC
AAGCTCAGCC GCGACGCCTT CATGCGCGAA ATCGCCGCGA TGACGCAGAA GATCGTCGCC
AAGGCCAAGG AGTACGACCG CGACACCATC CCCGGCGACT ATGCGACGCT GAAGACGCCC
TGCCCGAAAT GCGGCGGCGT CGTGAAGGAG AACTACCGCC GCTTCACCTG TGCCGCGAAA
TCAGGCGACG CCGAGGGCTG CGGCTTCAGC ATCAGCAAGA TCCCCGGCGG GCGCAGCTTC
GAGCTCGATG AAGTGGAGTC CTTCATCGCC GACAAGAAGA TCGGCCCGCT CGAGGGCTTC
CGCTCCAAGG CCGGCTGGCC CTTCACGGCC GAACTCAAGC TGGCGTACGA CGACGAGATC
GCCAACTGGA AACTCGAGTT CGACTTCGGC GACGACGCCA AGAAGGGCGA AGGCGACGGC
ACGCCGGTCG ACTTCTCGGC GCAGCAGAGC CTGGGCGCCT GCCCCAAGTG CAAGGGGCAT
GTCTACGAGC ACGGCAGCAG CTACGTCTGC GAGCACGCGG TCGGCGCGCA CGTCACCTGC
GACTTCAAGA GCGGCAAGAT CATCCTGCAG CAGCCGGTGG CGCGCGAGCA GATGACCCGG
CTGCTGCAGG AAGGCAAGAC CGATCTGCTG GAGAACTTCG TGTCCAACAA GACGCGGCGC
AAGTTCAAGG CGCGCCTGGC CTGGGACGCC AAGGAAGGCA AGGTCGGCTT CGAGTTCGAG
CCGAGGGCGG CCAAGGTGCC GGCCAAGAAG TCCGGGGTTC GCGCCGGCAC CAAATCGTGA
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| Protein sequence | MACGTALRSG DNDIENMSKA LVIAEKPSVA QDIVRALTPT SGKFEKHDDH FENEHYVVTS
AVGHLVEIKA PEEYDVKRGK WSFAHLPVIP PHFDLAPIDK AKSRLNAVVK QVKRKDVGEL
INACDAGREG ELIFRLIVQY AGTEKKPIDK PVRRLWLQSM TPQAIRDGFE RLRSDADLRG
LADAARSRSE ADWLVGINGT RAMTAFNSRD GGFFLTTVGR VQTPTLSIVV EREEKIRKHV
ARDYWELKAT FAAQAGEYEG KWFDPAWKKN DDAERRADRL WNEADAQAIA QAVRGQPATV
TEESKPSTQS SPQLYDLTLL QREANSRFGF SAKTTLSIAQ ALYEKHKVLT YPRTDSKALP
EDYVGVVKQT MEMLAAEDLP GPLKALSAHA RKAVKEGYVK PNKRIFDNAK VSDHFAIIPT
LQAPKSLTEV EAKLYDLVVK RFLAVFYPPA EFLVTTRIST VKAGSAEHRF QTHGKVMVKP
GWLAVYGRDV EDADATLVPV EPGEVVRTES VDVNALKTKP PARYTEATLL SAMESAGKLI
DDDELREAMQ EKGLGTPATR AQTIEGLILE KYMHRDGREL IPTAKAFQLM TLLRGLQVEE
LTQPELTGNW EYQLAEMEKG KLSRDAFMRE IAAMTQKIVA KAKEYDRDTI PGDYATLKTP
CPKCGGVVKE NYRRFTCAAK SGDAEGCGFS ISKIPGGRSF ELDEVESFIA DKKIGPLEGF
RSKAGWPFTA ELKLAYDDEI ANWKLEFDFG DDAKKGEGDG TPVDFSAQQS LGACPKCKGH
VYEHGSSYVC EHAVGAHVTC DFKSGKIILQ QPVAREQMTR LLQEGKTDLL ENFVSNKTRR
KFKARLAWDA KEGKVGFEFE PRAAKVPAKK SGVRAGTKS
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