| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A0251 |
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| Symbol | |
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| ID | 4786920 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | + |
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| Start bp | 273006 |
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| End bp | 274124 |
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| Gene Length | 1119 bp |
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| Protein Length | 372 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640088803 |
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| Product | tartrate dehydrogenase |
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| Protein accession | YP_001019448 |
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| Protein GI | 124265444 |
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| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
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| COG ID | [COG0473] Isocitrate/isopropylmalate dehydrogenase |
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| TIGRFAM ID | [TIGR02089] tartrate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.66296 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.147869 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCCCC ATCGCATTGC GGTGATTCCC GGCGACGGCA TCGGGCAGGA GGTGATGCCG
GAGGGCCTGC GCGTGCTGGA GGCCGCGGCG CAGCGCTTCG AACTGCCGCT GCAGTTCGAT
CATTTCGACT GGGCCTGCGC CGCCTACTGG CAGCGCACCG GGCAGATGCT GCCCGACGAC
TGGTTCGCGA CGCTGAGCGG CTACGACGCC ATCTACTTCG GCGCGGTCGG CTGGCCGGCG
GTGGTGCCCG ACCACGTGTC GCTGTGGGGC TCGCTGCTCA AGTTCCGCCG CGAGTTCGAC
CAGTACGTCA ACCTGCGCCC GGTGCGGCTG TTCGACGGCG TGCCGTGTCC GCTGGTCGAC
CGCGACGGCC GGCCGCGCAA GCCCGGCGAC ATCGACTTCT TCGTGGTGCG CGAGAACACC
GAGGGCGAGT ACACCCATCT CGGCGGGCGC CTCTTCGAAG GCACCGAGCG CGAGATCGTG
ATCCAGGAGT CGGTGTTCTC GCGCCACGGC ACCGACCGGG TGATGAAGTT CGCCTTCGAG
CTGGCGCAGT CGCGGCCGCG CAAGCACCTC ACCGTCGCCA CCAAGTCCAA CGGCATCGCC
ATCAGCATGC CGTGGTGGGA CGAACGCGCC GACGCGATGG CGCAGGGCTA CCCCGAGGTC
ACGGTCGACA AGCAGCACAT CGACATCCTC AGCGCGCGCT TCGTGCTGCA GCCGACTCGC
TTCGACGTCG TGGTCGCCAG CAACCTGTTC GGCGACATCC TCAGCGACCT GGGCCCGGCC
TGCACCGGCA CCATCGGCCT GGCGCCCTCG GCGAACCTGA ATCCGCAGCG CCATTTCCCC
TCGTTGTTCG AGCCGGTGCA CGGCTCGGCG CCCGACATCT TCGGTCGCGC GATCGCGAAC
CCGGTGGCGA TGATCTGGTC GGGCGCGCTG ATGCTCGACT TCCTCGGCGG CGCGATCGGT
GCGGACACCG CACGCCATCT GCAGGCCCAC GACGCCATCG TGGCGGCGAT CGAGCGGGTG
CTGGTGACCG GGCCGCGCAC GCCCGACCTG GGTGGCCACG CCTCGACGAC CGTGATGGGG
CGCGCGATCG CCGAGCAGGT GGCGGCCGGC GCGCCTTAG
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| Protein sequence | MKPHRIAVIP GDGIGQEVMP EGLRVLEAAA QRFELPLQFD HFDWACAAYW QRTGQMLPDD
WFATLSGYDA IYFGAVGWPA VVPDHVSLWG SLLKFRREFD QYVNLRPVRL FDGVPCPLVD
RDGRPRKPGD IDFFVVRENT EGEYTHLGGR LFEGTEREIV IQESVFSRHG TDRVMKFAFE
LAQSRPRKHL TVATKSNGIA ISMPWWDERA DAMAQGYPEV TVDKQHIDIL SARFVLQPTR
FDVVVASNLF GDILSDLGPA CTGTIGLAPS ANLNPQRHFP SLFEPVHGSA PDIFGRAIAN
PVAMIWSGAL MLDFLGGAIG ADTARHLQAH DAIVAAIERV LVTGPRTPDL GGHASTTVMG
RAIAEQVAAG AP
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