| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A0249 |
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| Symbol | |
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| ID | 4783958 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | + |
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| Start bp | 269756 |
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| End bp | 271342 |
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| Gene Length | 1587 bp |
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| Protein Length | 528 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640088801 |
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| Product | spermidine synthase |
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| Protein accession | YP_001019446 |
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| Protein GI | 124265442 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4262] Predicted spermidine synthase with an N-terminal membrane domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.264846 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCGAAC CGGCGGCACT CGATGGCGCG GCCGACGGCC GCGCGGCGGC AGCGGTGCGA
CCGGCCGAGG TGGCCTTGCT CGCCTCGGTG TTCGTCGTCG CGGCCTGCGG CCTGGTCTAC
GAGCTCGCAG CAGGGGCGCT GGCGAGCTAC CTGCTCGGCG ACTCGGTCCT GCAATTCAGC
ACCGTCATCG GCGCCTACCT GTTCGCGATG GGCATCGGCT CCTGGCTGTC GCGCCACATC
GAGCGCCAAC TGGTCGCGAA CTTCCTGCGC ATCGAGCTGC TGATCGGCCT GATCGGCGGG
CTGATGCCGG CGGCACTGTT CGTCGCGCAC AGCCTGCTGC CGGTCAGCGC GGTCGCGCCC
TTCCGTGCCC TGCTCTACGG GCTGGTGCTG GCGGTGGGCA TCCTGGTGGG CCTGGAGATC
CCGCTGGTGA TGCGCCTGCT CAAGCGCCAC TTCAGCGAGC GTTACGCGCT GAAGGACCTG
GTGTCGCAGG TGCTGACCTT CGACTATCTC GGAGCGCTGG CCGTGTCGGT CGCGTTCCCG
CTGCTGCTCG TGCCGCAGCT CGGGCTGGTC CGCACCGGCG TGGTGTTCGG CCTGCTGAAC
GTCGTCGTCG CGGTGTGGGC GCTGTGGCTC TTCCGGGCAG AACTGAGGGC CTGGCGCGCC
CATGCGCTGG CCTGCGCTGC CGTGCTCGCG GCGCTCGGTG CGGCGCTGAT CGGGGCCGAC
CGGCTCACGA CCTGGGCTGA GGACCGCTTC TACGGCGACC GCATCGTCTT CAGCCAGAGC
TCGCCCTACC AGCGCGTCGT CGTCACGTCG GGGGCGGCCG GCGTGCGGCT GTTCCTCAAC
GGCAACCTGC AGTTCCACTC GCGCGACGAG TACCGCTACC ACGAGGCGCT GGTGCATCCG
GCGATGGCGG CGCATGGCGC GCCCAAGCGG GTTCTGGTGC TCGGCGGCGG CGACGGCATG
GCGGTGCGCG AGGTGCTGAA GCACTCGACG GTCGAGCACG TCACGCTGGT CGAGCTGGAC
CCGGCGATGA CGCGCCTGTT CTCGACCGAA CCGCTGCTGA TCGCACTGAA TGGCGGGGCG
CTGAAGTCGC CCAAGCTCAC GATCGTCAAC GACGATGCCT TTGGCTGGCT GGACCGCCAC
GACGCGCTGT TCGACGTGAT CGTGGTCGAC TTCCCCGACC CCAGCAACCA CGCGATCGGC
AAGCTCTACT CGACCAGCTT CTACGCGCTG ATGGCCCGCC ATCTCGCGGC CTCCGGCTAC
GCGGTGGTGC AGACCACCTC GCCGCTGATC GCGCGCAAGA GCTTCTGGAC GGTGGTGAGC
ACCATCGAGG CCGTGGGCCT GCAGGCGTCG CCCTATCACG CGCACGTGCC GAGCTTCGGC
GAATGGGGCT TCGTGTTGGC CGGTCAACGT CCGCTGGCCA CGCCGCGCCG ACTGCCCGAG
GGCTTGCGCT TCCTGACCGT CGAGGGCCTG CCCGCGCTGT TCGACTTCCC GCCCGACATG
GCCCGCGTGC CCGCCGAGCC CAACCGCCTC AGCACCCAGG GGCTGGTGCA CACCTTCGAA
GAGGAATGGG GTCGCGTCCA CCAGTGA
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| Protein sequence | MSEPAALDGA ADGRAAAAVR PAEVALLASV FVVAACGLVY ELAAGALASY LLGDSVLQFS
TVIGAYLFAM GIGSWLSRHI ERQLVANFLR IELLIGLIGG LMPAALFVAH SLLPVSAVAP
FRALLYGLVL AVGILVGLEI PLVMRLLKRH FSERYALKDL VSQVLTFDYL GALAVSVAFP
LLLVPQLGLV RTGVVFGLLN VVVAVWALWL FRAELRAWRA HALACAAVLA ALGAALIGAD
RLTTWAEDRF YGDRIVFSQS SPYQRVVVTS GAAGVRLFLN GNLQFHSRDE YRYHEALVHP
AMAAHGAPKR VLVLGGGDGM AVREVLKHST VEHVTLVELD PAMTRLFSTE PLLIALNGGA
LKSPKLTIVN DDAFGWLDRH DALFDVIVVD FPDPSNHAIG KLYSTSFYAL MARHLAASGY
AVVQTTSPLI ARKSFWTVVS TIEAVGLQAS PYHAHVPSFG EWGFVLAGQR PLATPRRLPE
GLRFLTVEGL PALFDFPPDM ARVPAEPNRL STQGLVHTFE EEWGRVHQ
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