| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A0246 |
|---|
| Symbol | |
|---|
| ID | 4783955 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylibium petroleiphilum PM1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008825 |
|---|
| Strand | + |
|---|
| Start bp | 266752 |
|---|
| End bp | 267792 |
|---|
| Gene Length | 1041 bp |
|---|
| Protein Length | 346 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640088798 |
|---|
| Product | putative transmembrane protein |
|---|
| Protein accession | YP_001019443 |
|---|
| Protein GI | 124265439 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4260] Putative virion core protein (lumpy skin disease virus) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.678678 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.247964 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGCTGA TGGATTTCAT CAAGAAGCAG TTCATCGACA TCCTCGAATG GACCGAGGGC
GACGACGGCA CGCTGGCCTG GCGCTACCCG ATGGCCGGCA ACGAGATCCA GTACGGCGGC
TCGCTGACGG TGCGCGAATC GCAGATGGCG GTGTTCGTCA ACGAGGGCAA GGTGGCCGAC
GTGTTCGGCC CCGGCATGTA CAAGCTCACC ACCCAGACGC TGCCGGTGCT GACCTACCTG
AAGAACTGGG ACAAGCTGTT CCAGTCGCCG TTCAAGAGCG ACGTGTACTT CTTCAGCACG
CGCCAGCAGA TCGACCAGCG CTGGGGCACG ACCCAGCCGG TGACGATCCG CGACAAGGAC
TTCGGCGCGG TGCGCCTGCG CGCCTTCGGT AACTACGCCT ACCGCGTGGC CGATCCCAAG
CGCTTCCACA CCGAGATATC GGGCACGCGC GAGCGCTATA CCGTGGCCGA CCTCGACGGC
CAGCTGCGCG CGCTGATGCT GCAGCACATC AGCGACGCGG TGGCCTCCAG CGGCGTGCCC
TTCCTCGACC TGGCGGCCAA TCAGGTCGAG TTCGCGCAGC AGCTCGCCAC CGTCACCGCG
CCGGCCTTCG AGAAGATCGG CCTGAAGCTC GAGGGCGTGA CGGTGCAGAA CGTCTCGCTG
CCCGAGGAGC TGCAGAAGGT GCTCGACCAG AAGATCGGCA TGGGCATGGT CGGCGGCGAC
ATGGGCAAGT TCATGCAGTA CCAGACGGCG CAGGCGATCC CGAAGTTCGC CGAAGGAGGC
GGAGCCGGTG GCGGCAGCGG CATCGCGGGC GACGCGATGG GCCTGGGCGC GGGCGTTGCG
CTCGGTCAGG TGCTGGCGCA GAACCTGCAG CAGGGCCTGC AGGGCGGCGG CGCGGCAGCA
GCCCCCGCCG CGCCGGCCGC GATCGCACCC GACCAGGTGA TGGCGACGAT CGAGAAGCTG
GCCGACCTGA AGGCCAAGGG CATCCTCACC GACGAGGAGT TCGCGGCGAA GAAGGCCGAG
CTGCTGAAGA AGCTGGTGTG A
|
|---|
| Protein sequence | MALMDFIKKQ FIDILEWTEG DDGTLAWRYP MAGNEIQYGG SLTVRESQMA VFVNEGKVAD
VFGPGMYKLT TQTLPVLTYL KNWDKLFQSP FKSDVYFFST RQQIDQRWGT TQPVTIRDKD
FGAVRLRAFG NYAYRVADPK RFHTEISGTR ERYTVADLDG QLRALMLQHI SDAVASSGVP
FLDLAANQVE FAQQLATVTA PAFEKIGLKL EGVTVQNVSL PEELQKVLDQ KIGMGMVGGD
MGKFMQYQTA QAIPKFAEGG GAGGGSGIAG DAMGLGAGVA LGQVLAQNLQ QGLQGGGAAA
APAAPAAIAP DQVMATIEKL ADLKAKGILT DEEFAAKKAE LLKKLV
|
|---|
| |