| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A0214 |
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| Symbol | |
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| ID | 4783999 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | - |
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| Start bp | 230567 |
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| End bp | 233017 |
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| Gene Length | 2451 bp |
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| Protein Length | 816 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640088765 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_001019411 |
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| Protein GI | 124265407 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.419682 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCACTGC CGGCCTTCAT GACGCCCAAG CGCCTGCAGT TCCGCATCGT CGCGCTGTTC
CTGGGCCTGC TGCTGGTGGT GCAGCTGGCC AGCCTGCTGC TGATCGGCAA CAGCATCAGC
GTCAACGCCC GCAGCGCCGT GAACGCCGAG CTGCGCACCG CCGAGCGGGT GTTCGAGCAC
CTGCTGGCGC AGAACGCGGG GCGGCTCACC GATGCAGCGC GGCTGCTGGC GTCCGACTTC
GGCTTCCGCG CCGCCGTGGC CAGCAACGAC GGCGAGACGC TGGCCTCGGC GCTGGCCAAC
CAGGGCGATC GCATCGGCGC GAGCCTGGCG GTGTTCACCG ATGCCCGCTT CAACCTGAAG
GCCGCCACGC ACGACGGCGC CGAGCGCTTC CTGCCCACGC TGCGGCAGCT GGCCACGGCC
CCCGACGCCA CGCAGCGCCT GGTCCTGCTG GACGGCGAGC CCTACCAGCT GGTGGCCGTG
CCGGTGAAGG CGCCGCTGAC GATCGGCTGG GTCGCGATGG GCTTCCGCAT CGAGGCGAGC
CTGCTGCAGG AGATGCAGCA GCTGTCGTCG ATCGACGTCG CGCTGCTCAC GCAGCGCGGC
AGCCCGCCGC GCTGGGACGT GCTGCAGTCC ACGCTGGACC CGGCGGCCTC GCCGCAGCTC
GTCGAGCAAT GGCTTCTGGC GCGCGAGACG CAGGCCACCC ACCAGATGTC GCAGAAGGAG
CGCCACGCCA CCCTGACGCT GACCGACGAC GGCGGCAGCC GACTCAGCGG CCACCTGCTG
GCGCGCGACA TGCCGCTGGG CCGCGAGGGC GAGCCGCAGA CGGTGGCCGT GTTGATGCGC
TCGCTGGACG AGGCCACCGC GCCCTACCGT CGCCTGCAGT GGATCCTGCT GGCCTTCACG
CTGGTGGCGA TCGCGGTGTT CGCGGTCGTC AGCGTCTACA CCGCGCGCCG CATCACCACC
CCGTTGAAGA CACTGGCCGG CTCGGCACGC CGGCTCGGCC AGGGCGACTA CGAGCAGGCT
GTGCCGGCGC GCACGGACGA CGAGATCGGC GAGCTGGCGC AGGCCTTCGA GACCATGCGC
CTGGCGGTGC GCGAACGGGA AGGCGAGGTG CGCCGGCTGG CCTTCGAGGA CGGGCTCACG
CAGCTGCCGA ACCGCGAGCA GTTCCGCGCC GACCTGCGAG CCGCGATCCA GCACGCACAG
GCCCGCAACG AACCGTGCGC GGTGCTGATG CTCGACCTGG ACCGCTTCAA GCATGTCAAC
GACGTGCTCG GGCACCGCTT CGGCGACCGG CTGCTGCAGG AGGTGGCCAA GCGCCTGACG
CAGGAGGCAC GGCGCAGCAA CGACGTGGTG GCGCGCCTGG GTGGCGACGA GTTCGCGATG
CTGATGCCGA GCGCCGACAT CGCGCTCGCG CTCGGCATCG CGCAGCGCAT CCAGCGCGCC
TTCGAGCGCC CGATCTCGCT GGACGACCAC ACCGTCGACC TGGGTGCCGG CATCGGCATC
GCCTGCTGCC CCGCGCACGG CGTCGAGGCG GACACGCTGG TCAGCCGCGC CGAGCTGGCG
ATGTACGCGG CCAAGCAGCA CCAGCTCGGC GTGAAGGTCT ACGACGCGGC TCTCGACATG
AGCAGCGACG AATCGCTGTC GCTGCTGAGC GAACTGCGCA CCGCGGTCGA CCGCGACCAG
TTGCGCCTCT ACCTGCAACC CAAGATCTCG CTCGCCACCG GCGCGGTGCT CGGCGCCGAA
GCGCTGGTGC GCTGGCAGCA CCCGCAGCGC GGCCTGGTGC CGCCGGGCAA GTTCATACCG
TTCGCCGAGC AGACCGGCTT CATCCGCGTA CTGACCGGCT GGATGATCGA GCGCAGCGCG
ATGGTGCTGC GCCAGATGAA CGCCGGTGCG CCGGCCCTGA AGATCTCGGT GAACCTGTCG
ACCCGCGACC TGCTCGATCA GGACCTGCCG GCCAAGATGC AGCGCCTGAT CGACACCCTG
GCGTTGAACC CGGGCTCGAT GTGTCTCGAG ATCACCGAGA GCGCGATCAT GGACGACCCG
CAGCGCGCCC TGCAGACGCT GGAGCGGCTG CACGCGATGG GCTTCAAGCT GTCGATCGAC
GACTTCGGGA CCGGCTACTC CTCGCTGGCC TATCTCAAAC GCCTGCCGGT CGACGAGCTG
AAGATCGACC AGAGCTTTGT ATTCAACATG GAGCGCGATC TCGACGACGC GAAGATCGTG
CGATCCACCA TCGACCTGGC GCACAACCTC GGCCTGAACG TGGTGGCCGA GGGCATCGAA
ACGGCCAAAG CCTGGAAGTT GCTGCAGGCG CTGGGCTGCG ACGAGGCGCA AGGCTACTTC
GTCGCCAAGC CGATGCCCGA GGCCCTGTTC GCCGACTGGA TCCGCGACTG GACCGCACCG
CAGGTGCAAG CGGTGCGGCT GGACACCGAC TTCAGCCGGC TGGCGCTCTG A
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| Protein sequence | MPLPAFMTPK RLQFRIVALF LGLLLVVQLA SLLLIGNSIS VNARSAVNAE LRTAERVFEH
LLAQNAGRLT DAARLLASDF GFRAAVASND GETLASALAN QGDRIGASLA VFTDARFNLK
AATHDGAERF LPTLRQLATA PDATQRLVLL DGEPYQLVAV PVKAPLTIGW VAMGFRIEAS
LLQEMQQLSS IDVALLTQRG SPPRWDVLQS TLDPAASPQL VEQWLLARET QATHQMSQKE
RHATLTLTDD GGSRLSGHLL ARDMPLGREG EPQTVAVLMR SLDEATAPYR RLQWILLAFT
LVAIAVFAVV SVYTARRITT PLKTLAGSAR RLGQGDYEQA VPARTDDEIG ELAQAFETMR
LAVREREGEV RRLAFEDGLT QLPNREQFRA DLRAAIQHAQ ARNEPCAVLM LDLDRFKHVN
DVLGHRFGDR LLQEVAKRLT QEARRSNDVV ARLGGDEFAM LMPSADIALA LGIAQRIQRA
FERPISLDDH TVDLGAGIGI ACCPAHGVEA DTLVSRAELA MYAAKQHQLG VKVYDAALDM
SSDESLSLLS ELRTAVDRDQ LRLYLQPKIS LATGAVLGAE ALVRWQHPQR GLVPPGKFIP
FAEQTGFIRV LTGWMIERSA MVLRQMNAGA PALKISVNLS TRDLLDQDLP AKMQRLIDTL
ALNPGSMCLE ITESAIMDDP QRALQTLERL HAMGFKLSID DFGTGYSSLA YLKRLPVDEL
KIDQSFVFNM ERDLDDAKIV RSTIDLAHNL GLNVVAEGIE TAKAWKLLQA LGCDEAQGYF
VAKPMPEALF ADWIRDWTAP QVQAVRLDTD FSRLAL
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