| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A0208 |
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| Symbol | |
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| ID | 4783991 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | + |
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| Start bp | 224727 |
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| End bp | 226853 |
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| Gene Length | 2127 bp |
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| Protein Length | 708 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640088757 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_001019405 |
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| Protein GI | 124265401 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.832424 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCGAAA CTGCTTACCT CTTTCGCTTG CGAGCTCTCG ATACTGAGGC TATGGCCGAT
GTCGATGCCC CCGTCGTGCC CACGCCGCTC GCTTCACGCT GGCGGCGACT GTTGCCGTGG
GCGCTGCTCG TGCTATTGCT GGGCGTGGCC CAGACACTGC TGCTGGCACT GACGGTGCAG
CACGAGAACA ACCGCGAGCA GGAGCGAGTG GAGATGGCCG CCGCCTCGGC CGCGGCCAAC
GTGCGGCAGC TGCTCCTGCG CGACGTGCAG AGTCTGCAGG CCCTGCTGTG GAACGATCCG
CAACCCGCCC AATGGCGCTC CGACGCGGCC GACCTGCTGC GTGCGCGGCG CGAGATGCTG
CGCATCGAAT GGCGCAGTGG CGCCAACGTG ATCGAGACGG CCGCCGATTC GCCCTACGGT
GGGCCGCTGT TCGTCAGCCT GGCGCGCAGT GACCTCGATC TGGACACGCA GGCCGCGTGT
GCCGACGCGC AGCGGCTGGC GGCGCCGGCC TGGTCACGCA GCTACTTCGT GCCTCAGCCC
GGCGGACTCG GGGTCGAGGT GATCGACGTC TGCCTGCCGA TCGGTCCGAA TGGCGAGCGC
GGCGCGATGG TGGCCACGCT GGCGCTCGGC GGGGTGATCG ACGAAGCCGT CGCGCCTGAA
CTGGCGCGCA GCCACGAGCT GTCGTTCGTC GAAGGTGACG GTACGCGCCT GGCGCGCGGA
GGGCTGACGC GCGGAGCCGG CATCTATGTC ACCGAGCGCC TGGTCAACCT GTCGAGCCTC
ACGCTGGCGT TGCGGCTCGA CAGCGCGGCC GGCGCGCCGC GACTGATCCC CAACGTGGCG
ACCTCGCTGG TGCTCGGCCT CTCGCTTGCG CTGGCGGCGG TGGTGGCGTT GCTGGCGCGC
GACGTGCGTC GCCGCGCGGC GGCGGAGCAG CGTCTCGGTG AGGAACTGAC GCTGCGACGC
GCGATGGAGG ACTCGCTGGT GACCGGCCTG CGCGCGCGTG ACCGGCAGGG CCGCGTCACC
TACGTCAATC CGGCCTTCTG CAAGATGGTG GGCTTCAGTG CCGAGCAGCT GGTCGGGCAG
ACCACACCGC CCTACTGGCC GCCCGAGATG CTCAGCGCCT ACGAGGCGCG CCAGGTGCAG
CGCATGGCGC AGGGCGTGCC GGCGCACGAG TCGCGCGACG GATTCGAGAC CACTTTCATG
CGCGCTGGCG GTGAGCGCTT CCCGGTGCTG ATCTTCGAGG CGCCGCTGGT GGGTCCCGAC
GGGCTGCAGA GCGGCTGGAT GAGTGCGGTG CTCGATCTCA GCGCGCAGCG CCGCGTCGAG
GAGCGCGCGC GCCAGCAGCA GGAGCAGCTG CAGGCCACCG CCCGGCTTGC CAGCGTCGGC
GAGATGGCCT CGCTGCTGAG CCACGAGCTC AATCAGCCGC TCGCGGCCAT TGCCAGTTAC
GCGACCGGCT CGCTGAACCT GATCGACGAT GCCGGCGAGC GACCCGATCC GCCGAGCTTG
GCGATGATCC GCGAGGCCAC GCAGCACATC GCCGAGCAGG CCGAGCGCGC CGGCCGCGTC
ATCCGCAGCG TGCACGACTT CGTGCGTCGC CGCGAGCAGA GCCGCGAGAG CCTGAGCTGC
GACCAGCTCG TGGAGGCGGT GATGCCGCTG CTGCGCCTGC AGGCGCGCAA GTGCGGCGCG
CGCATCGAGT TCGAGTTCGG CAGCCCGCCA CCGCGTGTCG TGTGCGACCG CACGATGGTC
GAGCAGGTGC TGCTCAACCT GACCCGTAAC GCGCTGCAGG CAATGGTGGG CGAGCCGGCG
GAGCGCCGCG TGGTGCGGCT CGGCGCCCGC ACCCACGGCG CCTGGGTGCG GCTGAGCGTG
ACCGATCACG GCCCCGGCAT CGAGCCCGAG GTCGCAGCCC GGCTGTTCAC GCCCTTCTTC
ACCACCAAGG CCGAAGGGAT GGGGCTGGGC CTGAGCCTGT GCCGGACGGT CGTCGAGCAG
CACGGCGGGG CGCTCGACTT CACGACGCTG CGCGACGGCG AGGGCCGCGT GCGCGGCACC
TGTTTCGAGT TCACACTTCC GGCTGCCGGG CCCGCTTCCT CCCCGGCGGC AGCCCCTCCG
GGCGTTCTCG ATGGAGTCTC TGCATGA
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| Protein sequence | MRETAYLFRL RALDTEAMAD VDAPVVPTPL ASRWRRLLPW ALLVLLLGVA QTLLLALTVQ
HENNREQERV EMAAASAAAN VRQLLLRDVQ SLQALLWNDP QPAQWRSDAA DLLRARREML
RIEWRSGANV IETAADSPYG GPLFVSLARS DLDLDTQAAC ADAQRLAAPA WSRSYFVPQP
GGLGVEVIDV CLPIGPNGER GAMVATLALG GVIDEAVAPE LARSHELSFV EGDGTRLARG
GLTRGAGIYV TERLVNLSSL TLALRLDSAA GAPRLIPNVA TSLVLGLSLA LAAVVALLAR
DVRRRAAAEQ RLGEELTLRR AMEDSLVTGL RARDRQGRVT YVNPAFCKMV GFSAEQLVGQ
TTPPYWPPEM LSAYEARQVQ RMAQGVPAHE SRDGFETTFM RAGGERFPVL IFEAPLVGPD
GLQSGWMSAV LDLSAQRRVE ERARQQQEQL QATARLASVG EMASLLSHEL NQPLAAIASY
ATGSLNLIDD AGERPDPPSL AMIREATQHI AEQAERAGRV IRSVHDFVRR REQSRESLSC
DQLVEAVMPL LRLQARKCGA RIEFEFGSPP PRVVCDRTMV EQVLLNLTRN ALQAMVGEPA
ERRVVRLGAR THGAWVRLSV TDHGPGIEPE VAARLFTPFF TTKAEGMGLG LSLCRTVVEQ
HGGALDFTTL RDGEGRVRGT CFEFTLPAAG PASSPAAAPP GVLDGVSA
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