| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A0187 |
|---|
| Symbol | |
|---|
| ID | 4783511 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylibium petroleiphilum PM1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008825 |
|---|
| Strand | + |
|---|
| Start bp | 204091 |
|---|
| End bp | 204933 |
|---|
| Gene Length | 843 bp |
|---|
| Protein Length | 280 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 640088735 |
|---|
| Product | PhzF family phenazine biosynthesis protein |
|---|
| Protein accession | YP_001019384 |
|---|
| Protein GI | 124265380 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0384] Predicted epimerase, PhzC/PhzF homolog |
|---|
| TIGRFAM ID | [TIGR00654] phenazine biosynthesis protein PhzF family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.696184 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGCGA ACCCCGCTCG CCGCTTCTCG CAGGTCGACG TGTTCACCGC CGAGCCGTTG
CGCGGCAACG CCGTCGCGGT GGTGTTCGAC GCCGAGGGCC TGGACGACGC GCAGATGCAG
GCCTTCGCGC GCTGGACCCA GCTCAGCGAG ACCACCTTCC TGCTGCCACC CACCGATCCG
TCCGCCGACT ACCGCCTGCG CATCTTCACC CCGGCCGAGG AACTGCCGTT CGCCGGCCAT
CCCACGCTCG GCAGTTGCCA CGCCTGGCTC GAGGCGGGCG GCCGGCCACG CACGGACGAG
GTGGTGCAGG AATGCGGTGT CGGACTCGTG CGGATACGAC GTGACGGCCG CCGGCTGGCG
TTCGCCGCGC CGCCGCTGCG CCGCAGCGGC GCCGTCGACG AGGCCACGCG GGCGCAGATC
GCCCGCGCCC TGCGCGTCGA CGCGAGCGAA CTGCTGGCGA CGCAATGGGT CGACAACGGA
CCGGGCTGGG TGGCCGCGCT GCTGCCCAGC GCCGCGGCCG TGCTGGCGCT CGAGCCCGAT
TACGTCGCGA TGCAGCCGCT CAACCTCGGC GTGATCGGGG CGCAGACGCC GGGTCACGAC
ACCGCCTTCG AGGTGCGCGC CTTCGTGCCC TCGCTCGGCG TGCCCGAGGA CCCGGTGACC
GGCAGCCTGA ACGCCGGTCT GGCGCAGTGG CTGATCGGCG CCGGGCTGGC GCCGGCGCGC
TACGTCGCGA GCCAAGGGGG CCGGCTCGGG CGCGCGGGGC GGGTGCACGT GGATCAGGTC
GGTGCGGACC TCTGGGTCGG CGGCGACTCG GTGACCTGCA TCGTCGGCAG CTTGCGGCTG
TGA
|
|---|
| Protein sequence | MSANPARRFS QVDVFTAEPL RGNAVAVVFD AEGLDDAQMQ AFARWTQLSE TTFLLPPTDP
SADYRLRIFT PAEELPFAGH PTLGSCHAWL EAGGRPRTDE VVQECGVGLV RIRRDGRRLA
FAAPPLRRSG AVDEATRAQI ARALRVDASE LLATQWVDNG PGWVAALLPS AAAVLALEPD
YVAMQPLNLG VIGAQTPGHD TAFEVRAFVP SLGVPEDPVT GSLNAGLAQW LIGAGLAPAR
YVASQGGRLG RAGRVHVDQV GADLWVGGDS VTCIVGSLRL
|
|---|
| |