| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A0178 |
|---|
| Symbol | |
|---|
| ID | 4784141 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylibium petroleiphilum PM1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008825 |
|---|
| Strand | + |
|---|
| Start bp | 193515 |
|---|
| End bp | 194702 |
|---|
| Gene Length | 1188 bp |
|---|
| Protein Length | 395 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640088726 |
|---|
| Product | lipid-transfer protein |
|---|
| Protein accession | YP_001019375 |
|---|
| Protein GI | 124265371 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0183] Acetyl-CoA acetyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.925449 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCAACA GAGTCTGCAT TGCCGGCGTG GGCATGATCG CCTTCGCCAA GCCCGGCGCC
AGCGAGCCCT ATCACCTGAT GGCCGCGCGG GCCGGTCGCC AGGCCCTGGC CGACGCCGGC
ATCGGCTACG ACGCGCTGCA GCAGGCCTAC GTGGGCTATG TCTATGGCGA CTCCACGAGC
GGCCAGAAGG CGGTCTACGA GCTCGGCATG ACCGGCATCC CGGTGATCAA CGTCAACAAC
AACTGCTCGA CCGGCTCGAC CGCGCTGTTC CTGGCGCGCC AAGCGGTGGA GAGCGGCGCC
GCCGACTGTG TGCTGGCGCT CGGCTTCGAG CAGATGAAGC CCGGCGCGCT CGGCACGGTG
TTCGACGACC GGCCCAGCCC CTTCGAGGAC TTCGACCGCG AGGCCGAGGC CTTGGTGGGC
ATGCCGGAGC TGCCGCTCGC GCTGCGCTAC TTCGGCGGGG CCGGCCTCGG CCACATGCAG
AAGTACGGCA CGCCGCTGGA GGCCTTCGCC CGGATCCGCG CCAAGGCCAG CCGCCACGCC
GCGCGCAACC CGCTGGCGCT GCTGCGCAAG GAGCTCAGCA CCGAGGACGT GATGAACGCG
CCCATGCTCT GGCCCGGCGT GATGACGCGC CTGATGGCCT GCCCGCCCAC TTGCGGCGCG
GCGGCGGCGG TGCTCGTCTC CGAGGCCTAC GCCAGGAAGA ACGGCCTGCG CACCGACGTG
GCGATCCGCG CCCAGGCCAT GACCACCGAC CGGCCCGACA CCTTCGACAG CCGCGACATG
ATGAAGGTGG TGGGGGCCGG CATGAGCCGT GCCGCTGCGC AGAGCGTCTA CGAGCAGGCC
GGGATCGGTC CCGAGGATCT GGACGTGGTG GAACTGCACG ACTGCTTCGC GCACAACGAG
CTGATCACCT ACGAGGCGCT CGGCCTGTGC CCCGAGGGCG GCGCCGCCGC CTTCATCGAC
GCCGGCGACA ACACCTACGG CGGTCGCGTG GTCACCAACC CCTCGGGCGG CCTGCTCTCC
AAGGGCCATC CGCTCGGCGC CACCGGCCTG GCGCAGTGCT ACGAGCTGAC CCACCAGCTG
CGCGGCACGG CCGAGCAGCG CCAGGTCGAC GGCGCGCGCG TCGCGCTGCA GCACAACCTG
GGGCTGGGCG GGGCGTGCGT CGTGACCTTG TACGAAGCGA CCGCCTGA
|
|---|
| Protein sequence | MANRVCIAGV GMIAFAKPGA SEPYHLMAAR AGRQALADAG IGYDALQQAY VGYVYGDSTS
GQKAVYELGM TGIPVINVNN NCSTGSTALF LARQAVESGA ADCVLALGFE QMKPGALGTV
FDDRPSPFED FDREAEALVG MPELPLALRY FGGAGLGHMQ KYGTPLEAFA RIRAKASRHA
ARNPLALLRK ELSTEDVMNA PMLWPGVMTR LMACPPTCGA AAAVLVSEAY ARKNGLRTDV
AIRAQAMTTD RPDTFDSRDM MKVVGAGMSR AAAQSVYEQA GIGPEDLDVV ELHDCFAHNE
LITYEALGLC PEGGAAAFID AGDNTYGGRV VTNPSGGLLS KGHPLGATGL AQCYELTHQL
RGTAEQRQVD GARVALQHNL GLGGACVVTL YEATA
|
|---|
| |