| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A0162 |
|---|
| Symbol | |
|---|
| ID | 4784125 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylibium petroleiphilum PM1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008825 |
|---|
| Strand | + |
|---|
| Start bp | 170826 |
|---|
| End bp | 171563 |
|---|
| Gene Length | 738 bp |
|---|
| Protein Length | 245 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 640088710 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001019359 |
|---|
| Protein GI | 124265355 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5343] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.88805 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCCTCG ACGATCCGCA CGAGCGCAGC GCCACCGCCG GCGAGTACGT GCTGGGCACG
CTGGGCGCGT CCGAGCGTGC CGAGTTCCAG CGTGCGCTGG GGGAGGACGC GGCGCTCCAG
GCCGAGGTCT ACGCGTGGCA GGACCGCCTT CTCGGTCTCG CGGGCCGCGT CGCGCCGGCC
GAGCCGTCGG CCGGCCTGTG GCCGGCCATC GAAGCCCGCT TGCGCTCCGG TCCGGCCACG
GCGGCGGAGA TTCCGACGCG TGCTGCGGCC CTGCCGGCTG CCAACGACCC GGCCTGGCGC
CGCCTGCGGC GCTGGCAATG GACCAGCGGC CTGGCGATCG CCGCCTCACT GGTGCTGGCC
ACGCTGCTGG TGCTGCGCGC GCCGGCGCCG GCCGACGCGC CTCGCTACCT GGCGGTGCTG
CAGGCCCCGG GCAGCAACAC CACCGGCTGG GTCGTCGAGG CCACCGCTGG CGGGCAGTTG
CGGCTGGTGC CGGTCGGCAC GACCGAGGCC GTGCCGCCGG GCAAGGCGCT GCAGTTCTGG
ACCAAGGCCG AAGGCGCTGC CGGGCCCACC TCGCTCGGGC TGGTGCGGGC CGGGCAGGTC
ACCGAACTGC CGGTCGCGAC GCTGCCGACG CTGGAGGCGA GGCAGTTGTT CGAGCTCACG
CTGGAGCCCG AGACCGGCTC GCCGATCGGC CGGCCGACCG GGCCGATCCT GTTCGTCGGC
CGCTCGGTGC GCCTGTAG
|
|---|
| Protein sequence | MSLDDPHERS ATAGEYVLGT LGASERAEFQ RALGEDAALQ AEVYAWQDRL LGLAGRVAPA
EPSAGLWPAI EARLRSGPAT AAEIPTRAAA LPAANDPAWR RLRRWQWTSG LAIAASLVLA
TLLVLRAPAP ADAPRYLAVL QAPGSNTTGW VVEATAGGQL RLVPVGTTEA VPPGKALQFW
TKAEGAAGPT SLGLVRAGQV TELPVATLPT LEARQLFELT LEPETGSPIG RPTGPILFVG
RSVRL
|
|---|
| |