| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A0161 |
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| Symbol | |
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| ID | 4784124 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | + |
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| Start bp | 170263 |
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| End bp | 170829 |
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| Gene Length | 567 bp |
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| Protein Length | 188 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640088709 |
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| Product | sigma-70 region 2 |
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| Protein accession | YP_001019358 |
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| Protein GI | 124265354 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.299304 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCAGCA GTCCCCCCCG CCGCACGGCC GATCCTTTCG ACTACGAGTC GGCGCTCGAA
GCCTGCGCCC GTGGCGAACG CTTCGCGCTG CGGGCGCTCT ACGAGCGCGA GGCGCGCTGG
CTGCTCGGCG TGGCATTGCG CATCGTGCGG GACCGTGACA TGGCGCACGA CGTGCTGCAG
GACGCCTTCC TGCAGGTCTG GCAGCGGGCG TCGAGCTACC AGCGCGCGCT CGGGTCGGCG
CGCGGCTGGA TCTACACCGT GGTGCGCCAT CGCGCGCTCG ACGAGGTGCG CCGCGTGCGC
CGCGAGACGC CGGTGGGCGA CGAACTCGAA GCGCTGGCCG ACCAGCATGC CGCGTCGAAC
GCAGTGCATG AGCTGCCGCA TGCCGACGCG GCCTCGCTGT CGCGTTGCAT GGAGACGCTG
GACGAGCGCA AGCGCGACTG CATCGTCTAC GCCTTCGTCG AGGGCTACAC CCACGAGCAG
ATCGCGCAGC AGACCGCCAC GCCGGTCGGC ACCGTCAAAT CGTGGATCCG TCGCGGTCTG
CTGTCGCTGA AGGAGTGCCT GTCGTGA
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| Protein sequence | MSSSPPRRTA DPFDYESALE ACARGERFAL RALYEREARW LLGVALRIVR DRDMAHDVLQ
DAFLQVWQRA SSYQRALGSA RGWIYTVVRH RALDEVRRVR RETPVGDELE ALADQHAASN
AVHELPHADA ASLSRCMETL DERKRDCIVY AFVEGYTHEQ IAQQTATPVG TVKSWIRRGL
LSLKECLS
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