Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpe_A0150 |
Symbol | |
ID | 4784113 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylibium petroleiphilum PM1 |
Kingdom | Bacteria |
Replicon accession | NC_008825 |
Strand | - |
Start bp | 158046 |
End bp | 158675 |
Gene Length | 630 bp |
Protein Length | 209 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640088698 |
Product | OstA-like protein |
Protein accession | YP_001019347 |
Protein GI | 124265343 |
COG category | [S] Function unknown |
COG ID | [COG1934] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR03002] lipopolysaccharide transport periplasmic protein LptA |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.478454 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGATTC CCTCCATGTC CGCTCCGACC CCCTATCCTG CATCGCGGTG CACCTTGCTG GCGCAGCCTG TTTGCCGGGC CGTCCTGGCG GTGCTGGGGC TGGCCCTGCT GCCGGCCTTC GCCGCCGAAA AGGCTGACCG CACCCAGCCG CTGGCCTTCA CTGCCGACTC GGCCCGGGTC GACGAGGTCA AGCAATTGAA CATCCTGTCG GGCAACGTCG AGATCACCAA GGGCAGCATC GTCATCCGCG CCGACCGCGT GGAGGTGCGC CAGAGTCCCG AGGGCTACCA GTCCGCGGTG GCGACCGGCT GGCCGAACAA GCGTGCCTAC TTCCGCCAGA AGCGCGGCAG CAACGACGAG TACATCGAGG GCGAGGCCGA GCGCCTCGAG TACGACGGCC GCGGCGACAC CGTGCGGCTC GTGAACCAGG CCGTGCTGCG GCGCTTCCGC GGCAGCACGC TGGCCGACGA AGTGGCCGGC AACACCATCT CCTACGACAA CGTGACCGAG GTCTTCCAGG TGCTCGGCGG CCCGGCCTCC GCGGCCGCGC CAGGCCGGGT GCGCGGCGTG CTGACGCCGC GCGAGAACCC GGCTTCTGCG CCCAACTCCG GGGCGGGGAC GCGGCCATGA
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Protein sequence | MPIPSMSAPT PYPASRCTLL AQPVCRAVLA VLGLALLPAF AAEKADRTQP LAFTADSARV DEVKQLNILS GNVEITKGSI VIRADRVEVR QSPEGYQSAV ATGWPNKRAY FRQKRGSNDE YIEGEAERLE YDGRGDTVRL VNQAVLRRFR GSTLADEVAG NTISYDNVTE VFQVLGGPAS AAAPGRVRGV LTPRENPASA PNSGAGTRP
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