| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A0125 |
|---|
| Symbol | cysW |
|---|
| ID | 4784527 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylibium petroleiphilum PM1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008825 |
|---|
| Strand | + |
|---|
| Start bp | 127548 |
|---|
| End bp | 128462 |
|---|
| Gene Length | 915 bp |
|---|
| Protein Length | 304 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640088672 |
|---|
| Product | ABC type transporter |
|---|
| Protein accession | YP_001019322 |
|---|
| Protein GI | 124265318 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG4208] ABC-type sulfate transport system, permease component |
|---|
| TIGRFAM ID | [TIGR00969] sulfate ABC transporter, permease protein
[TIGR02140] sulfate ABC transporter, permease protein CysW |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
|---|
| Fosmid unclonability p-value | 0.0000364812 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGACGACCG GCGCCACGCT GGCCCTGAAG GCCGCTGCAC CCGCTGCGGC GGTCGCTCCG
ACGAACCTGC GCAACGCCAC CTCGGAGGCG CCCTGGGTGC GCCGCACGCT GATCGGCATC
GCGCTGGTGT TCCTGACGGT GTTCCTGTTC GTGCCGCTGT TCGCGGTGTT CTACGAGGCG
CTGAAGAAGG GCTGGGATGT CTATCTCGCG GCGATCGTCG AGCCCGACGC GCTGTCGGCC
ATCCGGCTCA CGCTGCTGGC GGCAGCGGTG TCGCTGCCGC TGAACCTGGT GTTCGGCGTG
GCGGCGGCCT GGTGTATCGC CAAGTTCAAC TTCCGCGGCA AGAACATCCT GCTGACGCTG
ATCGACCTGC CGTTCTCGGT GAGCCCGGTG ATCGCCGGCC TGATCTTCGT GCTGGTGTTC
GGCCTGCAGG GCTGGCTGGG CGGCTGGCTG CGCGAGCACG ACCTGAAGAT CATCTTCGCG
CTGCCTGGCA TCGTGCTGGC CACGGTGTTC ATCACCTTCC CGTTCATCGC GCGCGAGCTG
ATCCCGCTGA TGCAGGCGCA GGGCGTCGAG CAGGAAGAGG CGGCGCGCGT GCTGGGCGCT
TCGGGCTGGC AGATCTTCTG GCGCGTGACG CTGCCCAACA TCAAGTGGGC GCTGCTGTAT
GGCGTGATCC TGTGCAATGC GCGGGCGATG GGGGAGTTCG GCGCGGTGTC GGTGGTCTCG
GGCCACATCC GCGGCCAGAC CAACACGATG CCGCTGCACA TCGAGATCCT CTACAACGAA
TACCAGTTCG CGGCGTCGTT CGCGGTGGCT TCGCTGCTGG CCGGGCTGGC GCTGGTGACG
CTGGTGCTGA AGTACCTGGT GGAGCGACGG GTGAGAAACC AGATCAAGGG CGCGAGCGCG
CTGGAGGCCG TATGA
|
|---|
| Protein sequence | MTTGATLALK AAAPAAAVAP TNLRNATSEA PWVRRTLIGI ALVFLTVFLF VPLFAVFYEA
LKKGWDVYLA AIVEPDALSA IRLTLLAAAV SLPLNLVFGV AAAWCIAKFN FRGKNILLTL
IDLPFSVSPV IAGLIFVLVF GLQGWLGGWL REHDLKIIFA LPGIVLATVF ITFPFIAREL
IPLMQAQGVE QEEAARVLGA SGWQIFWRVT LPNIKWALLY GVILCNARAM GEFGAVSVVS
GHIRGQTNTM PLHIEILYNE YQFAASFAVA SLLAGLALVT LVLKYLVERR VRNQIKGASA
LEAV
|
|---|
| |