Gene Mpe_A0112 details

Gene Information

• Locus tag: Mpe_A0112
• Symbol: kefB
• ID: 4784514
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methylibium petroleiphilum PM1
• Kingdom: Bacteria
• Replicon accession: NC_008825
• Strand: +
• Start bp: 114919
• End bp: 116739
• Gene Length: 1821 bp
• Protein Length: 606 aa
• Translation table: 11
• GC content: 71%
• IMG OID: 640088659
• Product: Kef-type K+ transport
• Protein accession: YP_001019309
• Protein GI: 124265305
• COG category: [P] Inorganic ion transport and metabolism
• COG ID: [COG0475] Kef-type K+ transport systems, membrane components
• TIGRFAM ID: [TIGR00932] transporter, monovalent cation:proton antiporter-2 (CPA2) family

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.187349
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 6
• Fosmid unclonability p-value: 0.00403769
• Fosmid Hitchhiker: Yes
• Fosmid clonability: hitchhiker

Sequence

Gene sequence

ATGGCGGTCG AGGCAGCAGG CAACGAACAA CTGGTCCGTG TGGTGGTGCT GCTGGCCGCC 
GGCGTGGTGG CGGTGCCGCT GTTCAAGCGC CTCGGCCTCG GCTCGGTGCT CGGCTACCTG 
GCCGCCGGGC TGGCGATCGG GCCGTTCGGC CTGGGGTTGT TCGTCGACGC GCAGACCATC 
CTGCACGTGG CCGAGCTGGG CGTCGTGATG TTCCTGTTCG TCATCGGGCT GGAGATGCAG 
CCCAAGCGCC TGTGGAGCCT GCGCCGCGAG ATCTTCGGCC TGGGCCTGGC CCAGGTGGTG 
GCGTGCGGCG CATTGCTCAC CGGCGTCGGC ATGCTCGCCG GGCTGTCGGC GCCGGTGGCC 
TTCGTCGCCG CGATGGGCTT CGTGATGACC TCCACCGCCA CCGTCATGCT GATCCTCGAC 
GAGCGCGGCG AGACGGCCAC CTCGCGCGGC CAGCGGGTGG TCTCGATCCT GCTGCTGGAA 
GACCTGGCCA TCGTGCCGCT GCTGGCCATC GTGGCCTTCC TCGCGCCGGC GCACGCCGAT 
GTCGACAGTT CCATCTGGCG CGCGCTGCTG CTGGCGCTGG TGGCGGTGGG CAGCGTCACG 
ATCGCGGGGC GCTGGCTGCT CAATCCGATG TTCCGGCTGC TGGCGGCGGC GCGCGCGCGG 
GAGGTGATGA CCGCGGCCGC GCTGCTGGTG GTGCTGGGCG CTGCGCTGCT GATGCAGTTC 
GGCGGCCTGT CGATGGCGAT GGGCGCCTTC CTCGCCGGCG TGATGCTGTC GGAATCGAGC 
TTCCGGCATC AATTGGAGGC GGACATCGAG CCCTTCCGCG GCATCCTGCT CGGCCTGTTC 
TTCCTGAGTG TCGGCATGTC GCTCGACCTC ACGGTGTTCG CCAGCCACTG GCCCCAGGTG 
CTGGGCGGCG TGGTGGTGTT CATGCTGGTG AAGGCGGCCG GCATCTACGT CGTGGCGCGC 
GCGCTCGGCG CGCCGCACGG CGACGCGCTG CACCGCATGG TGCTGATGGC CCAGGGCGGC 
GAGTTCGCGT TCGTGCTGTA CTCGGCCGGC GTCAGCGCCG GGCTGCTCGA CGGCCCGATG 
AATGCGGTGC TCACCGCGAT CGTGATCCTG TCGATGGCGC TCACGCCGCT GGCGGTCGGG 
GCCCTGCGCT GGATGCTGCC GCGTGGCGCG GCCTCGCTCG AGGGCGTGGA CCGGGCCGAC 
GGCCTGACCG GCAGCGTGCT GATGATCGGC TTCGGCCGCT TCGGTCAGGT GGCCAGCCAG 
GCCCTGCTGG CGCGCGGGGT CGACGTGGCG ATCATCGACT CGGACACCGA GATGATCCAG 
AGCGCCGACG GCTTCGGCTT CAAGGTCTAC TACGGCGACG GCACCCGGCT CGACGTGCTG 
CACGCCTCCG GCGCCGCCAC GGCCGAGGCG ATCGCCGTCT GCGTGGACGA CAAGGCGGCG 
GCGCTGAAGA TCGTCGAGCT GGTGAAGCAC TCGTTCCCGC AGGCCCGCCT GCTGGTGCGC 
TCCTTCGATC GCGAGCACGC GCTGAAGCTC ATCGCCGCGG GCGTGGACTA CCAGGTGCGC 
GAGACCTTCG AGTCGGCCAG TGCCTTCGGC GAGGCCGCGT TGCGGGCCCT GGGCGCCACG 
CCCGACGAGG CCGCGCAGGT GGCGGCCGAG GTGCGCCGCC GCGACGACGA GCGCCTGCAG 
CTGCAGATCA CCGGCGGCCT GCGCGCGGGG GTGGGCATGA TGCTCAGCAA CCGCATGAAG 
CCCACGCCGC TGACCAAGCC GGCCCGTGCC GGCCTCGCCT TGAACGAAGA GACCGCGTCG 
GTCACGGCCA ACGCGCCTTA G 

 

Protein sequence

MAVEAAGNEQ LVRVVVLLAA GVVAVPLFKR LGLGSVLGYL AAGLAIGPFG LGLFVDAQTI 
LHVAELGVVM FLFVIGLEMQ PKRLWSLRRE IFGLGLAQVV ACGALLTGVG MLAGLSAPVA 
FVAAMGFVMT STATVMLILD ERGETATSRG QRVVSILLLE DLAIVPLLAI VAFLAPAHAD 
VDSSIWRALL LALVAVGSVT IAGRWLLNPM FRLLAAARAR EVMTAAALLV VLGAALLMQF 
GGLSMAMGAF LAGVMLSESS FRHQLEADIE PFRGILLGLF FLSVGMSLDL TVFASHWPQV 
LGGVVVFMLV KAAGIYVVAR ALGAPHGDAL HRMVLMAQGG EFAFVLYSAG VSAGLLDGPM 
NAVLTAIVIL SMALTPLAVG ALRWMLPRGA ASLEGVDRAD GLTGSVLMIG FGRFGQVASQ 
ALLARGVDVA IIDSDTEMIQ SADGFGFKVY YGDGTRLDVL HASGAATAEA IAVCVDDKAA 
ALKIVELVKH SFPQARLLVR SFDREHALKL IAAGVDYQVR ETFESASAFG EAALRALGAT 
PDEAAQVAAE VRRRDDERLQ LQITGGLRAG VGMMLSNRMK PTPLTKPARA GLALNEETAS 
VTANAP