| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A0110 |
|---|
| Symbol | |
|---|
| ID | 4784512 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylibium petroleiphilum PM1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008825 |
|---|
| Strand | - |
|---|
| Start bp | 112718 |
|---|
| End bp | 114175 |
|---|
| Gene Length | 1458 bp |
|---|
| Protein Length | 485 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 640088657 |
|---|
| Product | voltage gated chloride channel family protein |
|---|
| Protein accession | YP_001019307 |
|---|
| Protein GI | 124265303 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0038] Chloride channel protein EriC |
|---|
| TIGRFAM ID | [TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0419274 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.00996162 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | TTGCATGAGC CGGCCCAGGC ATCATCCGTG GGTGCGCGGG CCGCCGCTCG CGCACCGTCG
CACCGTCCCG CACCCTTGAA GAAGCAACCC GACTTCACCC AGGCCGTTCG CCAGGAACTG
GTCGACTGGC GCGCCTGGCG CGATCGCGCT GTGGTGCTGG CGTACGCGGT CGCCGCGGGG
CTCGCCGTGG TCGGCTTCAC GATGCTGAGC GAGCTGGCGC TCGAGGGCTT CGGTGCCCTG
CGCGCCCTGC ACCCGCTGCT GCCGCTGGTC TGGATGCCGG CGCTCACCGC GGCGCTGGTG
TGGGTCACGC TGCGCTGGGT GCCGGGGGCC GCCGGCTCCG GGATTCCGCA GGTGCTGGCG
GCGCTGGACA CGCGCACCTC GCCGTCGCAG CGTGGGCTGT TCGTGTCGCT GCGGCTGAGC
GTGGCCAAGC TGGTGCTGGC GTCGGGCGCG CTGCTGGCCG GGCTGTCGGC CGGGCGCGAA
GGACCATCGG TGCAGGTGGC GGCCGGAGTG ATGCTGCATG CACGCCGCTG GCTGCCGTCG
CGATCGAGCG TCACCGACCA CGGCCTGCTG ATCGCCGGCG GCGCCGCCGG CATCGCCGCC
GCCTTCAATG CGCCGCTGGC CGGTGTGGTG TTCGCGATCG AGGAGCTGTC GCGCAAGATC
GAGAACCGCA ACAGCGGACT CATCATCACC GCCATCGTGC TGGCCGGCCT GGTGGCGGTC
TCGGCCTTCG GCAACTCCAC GTACTTCGGC GTCATCCGCG TCGGCCGGCT CGACAGCGGC
GTGCTGCTGC CCGGCCTGCT GGTGGTGCTG TGCGCGGGCC TGCTGGGCGG CCTGTTCTCG
CGCCTGCTGA TCGTGTCGAT GGTCGGTGCG CCCGATCGCT TCTGCGCGCT GCGGCGGCGC
CATCCGGTGC GCTTCGCGGC CGGCTGCGGC TTCGTGGTGG CGCTGATCGG CATCGTCAGC
GGCGGCCTCA CCTATGGCAG CGGCTACGAC GAGACCAAGG GCCTGCTGGA CGGCGAACCC
GGCCTGCCGG TGCTGTTCGT GCTGCTCAAG TTCATCAGCA CCTGGCTGTC GACCTGGAGC
GGCGTGCCGG GCGGCATCTT CGCGCCCTCG CTGTCGGTCG GCGCGGGCAT TGGCGCCGAC
ATCGCGCAGC TCACCGGCTC GCCGGCCGGC GCGGCGCTGA TCGCCATCGG CATGGCCGGC
TTCCTGGCCG CCGTGACGCA GGCGCCGATC ACGGCTTTCA TCATCGTGAT GGAGATGGTC
GACGGCCACG CGATGGTGCT CAGCCTGATG GCTGCGGCGC TGGGGGCCAG CGGCGTCTCG
CGGCTGCTGA GCCGGCCGCT GTACGCCGAG CTGGCCGAGC TGCAGCTGCG ACGCCTGCCG
GCCGTGCCGT CGACGATGCC GCCGGACTCG GGCACCGCCA CCACCGCATT CCAGGACTCC
GCTCCCGGCA GGCCCTGA
|
|---|
| Protein sequence | MHEPAQASSV GARAAARAPS HRPAPLKKQP DFTQAVRQEL VDWRAWRDRA VVLAYAVAAG
LAVVGFTMLS ELALEGFGAL RALHPLLPLV WMPALTAALV WVTLRWVPGA AGSGIPQVLA
ALDTRTSPSQ RGLFVSLRLS VAKLVLASGA LLAGLSAGRE GPSVQVAAGV MLHARRWLPS
RSSVTDHGLL IAGGAAGIAA AFNAPLAGVV FAIEELSRKI ENRNSGLIIT AIVLAGLVAV
SAFGNSTYFG VIRVGRLDSG VLLPGLLVVL CAGLLGGLFS RLLIVSMVGA PDRFCALRRR
HPVRFAAGCG FVVALIGIVS GGLTYGSGYD ETKGLLDGEP GLPVLFVLLK FISTWLSTWS
GVPGGIFAPS LSVGAGIGAD IAQLTGSPAG AALIAIGMAG FLAAVTQAPI TAFIIVMEMV
DGHAMVLSLM AAALGASGVS RLLSRPLYAE LAELQLRRLP AVPSTMPPDS GTATTAFQDS
APGRP
|
|---|
| |