Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpe_A0093 |
Symbol | |
ID | 4783879 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylibium petroleiphilum PM1 |
Kingdom | Bacteria |
Replicon accession | NC_008825 |
Strand | - |
Start bp | 88219 |
End bp | 89241 |
Gene Length | 1023 bp |
Protein Length | 340 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640088640 |
Product | putative signal peptide protein |
Protein accession | YP_001019290 |
Protein GI | 124265286 |
COG category | [R] General function prediction only |
COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.485946 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.563302 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCAGT TCATCTCGTC ACCCCGCTAC CACTGCAGCC TGTGCGCCGC CTTCGCGCGA CTGAACGCAC CGGAGAACGC CGTGGACACC CCTACGCCCG CCCGCCCCGG GCGTCGCCGC TTCAATGCCG CGCTGGCTGG CGCGGGCGCC GCGCTGCTGC TGCCGGCTGC CGGCGCGCGC GAGGGCGTCG ATGTCGGCAA GCAGTCGAGC TTCTCGAAGC TGGTGCCGGC CGAGCAGGTC GAGCAGGCCG CGACGCAGCA GTACGCGCAA CTGCTGCAGG AGGCCCGCAA CAAGAACGCG CTGGTGGGCG CCGACGACAC GCAGACGGTG CGGCTGCGCG CCATCGCGCG GCGCATCATC CCGTTCACGC CTGAATGGAA CGGGCGCGCG CCCGGCTGGA AGTGGGAGGT GAACCTGCTG GCCAGCAAGC AGATCAACGC CTTCTGCATG CCGGGCGGCA AGATCGCCTT CTACACGGGC CTGATCGAAC AACTCAAGCT GACCGACGAC GAGGTCTCGA TGGTGATGGG CCACGAGGTC GCGCACGCGC TGCGTGAGCA CGCCCGAGAG CGCATGGGCA AGTCGACCGC CACCAACATC GGCCTGGAGA TCGGCGCGGC CCTGCTCGGG CTGGGCAATG CCAGCCGCAC CCTCGCCGGC ATGGGCGCGC AGCTGCTGCA GCTCAAGTTC AGCCGCGACG ACGAGTCCGA GGCCGACCTG GTGGGCATGG AGCTGGCTGC GCGCGCCGGC TACGACCCCC GCTCCGGCGT GAGCCTGTGG ACCAAGATGG GCCAGGCCAC CGGCGGCGGG GGTGGGGGCA GCGGCAACAA GCTGGCCGAG TACGGCTCCA CCCACCCGCA GGGGCCGACC CGCATCCGCG ACATCGAGGC CAACCTGCCG AAGGTGCTGC CGCTGTACGA GCGCGCGCCC AAGCCACCGC AACGCTGGGA CGCCGGTTTG ACCGACAGCG GTGACCGCAA GGCCACCAAG CCCGCCACGC CGACGCGCGA GCAGTCGCGC TGA
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Protein sequence | MSQFISSPRY HCSLCAAFAR LNAPENAVDT PTPARPGRRR FNAALAGAGA ALLLPAAGAR EGVDVGKQSS FSKLVPAEQV EQAATQQYAQ LLQEARNKNA LVGADDTQTV RLRAIARRII PFTPEWNGRA PGWKWEVNLL ASKQINAFCM PGGKIAFYTG LIEQLKLTDD EVSMVMGHEV AHALREHARE RMGKSTATNI GLEIGAALLG LGNASRTLAG MGAQLLQLKF SRDDESEADL VGMELAARAG YDPRSGVSLW TKMGQATGGG GGGSGNKLAE YGSTHPQGPT RIRDIEANLP KVLPLYERAP KPPQRWDAGL TDSGDRKATK PATPTREQSR
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