| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A0093 |
|---|
| Symbol | |
|---|
| ID | 4783879 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylibium petroleiphilum PM1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008825 |
|---|
| Strand | - |
|---|
| Start bp | 88219 |
|---|
| End bp | 89241 |
|---|
| Gene Length | 1023 bp |
|---|
| Protein Length | 340 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640088640 |
|---|
| Product | putative signal peptide protein |
|---|
| Protein accession | YP_001019290 |
|---|
| Protein GI | 124265286 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.485946 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.563302 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCAGT TCATCTCGTC ACCCCGCTAC CACTGCAGCC TGTGCGCCGC CTTCGCGCGA
CTGAACGCAC CGGAGAACGC CGTGGACACC CCTACGCCCG CCCGCCCCGG GCGTCGCCGC
TTCAATGCCG CGCTGGCTGG CGCGGGCGCC GCGCTGCTGC TGCCGGCTGC CGGCGCGCGC
GAGGGCGTCG ATGTCGGCAA GCAGTCGAGC TTCTCGAAGC TGGTGCCGGC CGAGCAGGTC
GAGCAGGCCG CGACGCAGCA GTACGCGCAA CTGCTGCAGG AGGCCCGCAA CAAGAACGCG
CTGGTGGGCG CCGACGACAC GCAGACGGTG CGGCTGCGCG CCATCGCGCG GCGCATCATC
CCGTTCACGC CTGAATGGAA CGGGCGCGCG CCCGGCTGGA AGTGGGAGGT GAACCTGCTG
GCCAGCAAGC AGATCAACGC CTTCTGCATG CCGGGCGGCA AGATCGCCTT CTACACGGGC
CTGATCGAAC AACTCAAGCT GACCGACGAC GAGGTCTCGA TGGTGATGGG CCACGAGGTC
GCGCACGCGC TGCGTGAGCA CGCCCGAGAG CGCATGGGCA AGTCGACCGC CACCAACATC
GGCCTGGAGA TCGGCGCGGC CCTGCTCGGG CTGGGCAATG CCAGCCGCAC CCTCGCCGGC
ATGGGCGCGC AGCTGCTGCA GCTCAAGTTC AGCCGCGACG ACGAGTCCGA GGCCGACCTG
GTGGGCATGG AGCTGGCTGC GCGCGCCGGC TACGACCCCC GCTCCGGCGT GAGCCTGTGG
ACCAAGATGG GCCAGGCCAC CGGCGGCGGG GGTGGGGGCA GCGGCAACAA GCTGGCCGAG
TACGGCTCCA CCCACCCGCA GGGGCCGACC CGCATCCGCG ACATCGAGGC CAACCTGCCG
AAGGTGCTGC CGCTGTACGA GCGCGCGCCC AAGCCACCGC AACGCTGGGA CGCCGGTTTG
ACCGACAGCG GTGACCGCAA GGCCACCAAG CCCGCCACGC CGACGCGCGA GCAGTCGCGC
TGA
|
|---|
| Protein sequence | MSQFISSPRY HCSLCAAFAR LNAPENAVDT PTPARPGRRR FNAALAGAGA ALLLPAAGAR
EGVDVGKQSS FSKLVPAEQV EQAATQQYAQ LLQEARNKNA LVGADDTQTV RLRAIARRII
PFTPEWNGRA PGWKWEVNLL ASKQINAFCM PGGKIAFYTG LIEQLKLTDD EVSMVMGHEV
AHALREHARE RMGKSTATNI GLEIGAALLG LGNASRTLAG MGAQLLQLKF SRDDESEADL
VGMELAARAG YDPRSGVSLW TKMGQATGGG GGGSGNKLAE YGSTHPQGPT RIRDIEANLP
KVLPLYERAP KPPQRWDAGL TDSGDRKATK PATPTREQSR
|
|---|
| |