| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A0092 |
|---|
| Symbol | |
|---|
| ID | 4783878 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylibium petroleiphilum PM1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008825 |
|---|
| Strand | + |
|---|
| Start bp | 87547 |
|---|
| End bp | 88194 |
|---|
| Gene Length | 648 bp |
|---|
| Protein Length | 215 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 640088639 |
|---|
| Product | putative metallo-beta-lactamase family protein |
|---|
| Protein accession | YP_001019289 |
|---|
| Protein GI | 124265285 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.76232 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCCAGT ACCTCACTGT CCCCGTCACC GCCTTCCAGC AGAACTGCTC CATCGTGTGG
TGCGACGCCA CGCGCCGCGC CGCCGTCATC GATCCCGGCG GTGAGCTGCC GCGGCTGCGG
GCCGAGGTGC GGCGGCTGGG GCTCACGCTC GAGGCGATCT GGCTGACCCA CGCGCACATC
GACCATGCGG GCGGCACCGC GCAACTCGCC CGCGAGGACG CGCTGCCGAT CATCGGGCCG
CACGCGGCCG ACCAGTTCTG GATCGACGGG CTGGCGCAGC AGAGCCGGAT GTTCGGCTTT
CCCCCCAGCG AGCCGTTCAC GCCGACGCGC TGGCTCTGCC CCGGCGGCGT GGACGACCGC
GTGACCCTGG GCGACTGCGA GCTCGAGGTG CGGCACTGTC CCGGGCACAC GCCGGGGCAC
GTGGTGTTCG TCTCGCGAGA AGCCCAAAGG GCCTTCGTCG GCGACGTGCT GTTCGCTGGC
GGCATCGGCC GCACCGATTT CCCGCTGGGC GATCACGACA CGCTGGTGGC GGCGATCCGC
ACCCAGCTCT GGCCGCTCGG TGATGACATC GTGTTCATCC CCGGCCACGG GCCGGAGAGC
AGCTTCGGCC GCGAGCGGCG CCACAACCCC TACGTGCGCG ACGTCTGA
|
|---|
| Protein sequence | MLQYLTVPVT AFQQNCSIVW CDATRRAAVI DPGGELPRLR AEVRRLGLTL EAIWLTHAHI
DHAGGTAQLA REDALPIIGP HAADQFWIDG LAQQSRMFGF PPSEPFTPTR WLCPGGVDDR
VTLGDCELEV RHCPGHTPGH VVFVSREAQR AFVGDVLFAG GIGRTDFPLG DHDTLVAAIR
TQLWPLGDDI VFIPGHGPES SFGRERRHNP YVRDV
|
|---|
| |