| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A0089 |
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| Symbol | |
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| ID | 4783875 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | + |
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| Start bp | 85229 |
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| End bp | 86020 |
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| Gene Length | 792 bp |
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| Protein Length | 263 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640088636 |
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| Product | DNA-(apurinic or apyrimidinic site) lyase |
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| Protein accession | YP_001019286 |
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| Protein GI | 124265282 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0708] Exonuclease III |
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| TIGRFAM ID | [TIGR00195] exodeoxyribonuclease III
[TIGR00633] exodeoxyribonuclease III (xth) |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.499029 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTTGCGTC TGGTCTCGCT CAATCTCAAC GGCATCCGTT CCGCGGCCAA CAAGGGCTGG
GTCGAATGGG CCGAGAAAAG CGCCATCGAT TGTATGGGCG TGCAGGAGCT CAAGGCCCAG
GCGGCCGACC TGGGCGGGCG TTTCGACCAG GTGGCCGGCC TGAAAGGCCA CTTCCACTAT
GCCGACAAGA AGGGCTACTC CGGCGTCGGC CTGTACACGC GCGGCACGCC GAGCGACGTG
ATCACCGGCA TCGGCGAGCC CGAGTTCGAT GCCGAGGGGC GCTACGTCGA GGCCCGCTTC
GACACGCCCC AGCGCAAGCT GTCGATCATC AGTTGCTACT TTCCCAGCGG CTCCAGCTCC
GACGAGCGGC AGCAGGCCAA GTTCCGTTTC CTGGCCCTGT TCTACCCTTA CCTCGAGCTG
CTGAAGGCGA CCCGCGAGTT CATCCTGGTG GGCGACGTGA ACATCGCGCA CCGCGAAATC
GACCTGAAGA ACTGGAAGAG CAACCAGAAG AACAGCGGCT TCCTGCCCGA GGAGCGTGCG
TGGATGAGCC GCGCGCTCGA CGAACTGGGC CTGGTCGACG TGCACCGCAC GCTGCGACCC
GACGACACGG GCGAGGCTTA CACGTGGTGG AGCAATCGAG GCCAGGCCTG GGCCAACAAC
GTCGGTTGGC GCATCGACTA CCACCTGGCG ACGCCGGCGC TCGCCGCGCT GGCGCGTTCG
GCGTCGGTCT ACAAGGCGCA GCGCTTTTCC GACCACGCCC CGTTGACGGT CGATTACGAA
CTTTCGCTGT GA
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| Protein sequence | MLRLVSLNLN GIRSAANKGW VEWAEKSAID CMGVQELKAQ AADLGGRFDQ VAGLKGHFHY
ADKKGYSGVG LYTRGTPSDV ITGIGEPEFD AEGRYVEARF DTPQRKLSII SCYFPSGSSS
DERQQAKFRF LALFYPYLEL LKATREFILV GDVNIAHREI DLKNWKSNQK NSGFLPEERA
WMSRALDELG LVDVHRTLRP DDTGEAYTWW SNRGQAWANN VGWRIDYHLA TPALAALARS
ASVYKAQRFS DHAPLTVDYE LSL
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